DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstE12 and mars1

DIOPT Version :9

Sequence 1:NP_001246500.1 Gene:GstE12 / 37960 FlyBaseID:FBgn0027590 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_956370.1 Gene:mars1 / 338183 ZFINID:ZDB-GENE-030219-83 Length:922 Species:Danio rerio


Alignment Length:225 Identity:44/225 - (19%)
Similarity:78/225 - (34%) Gaps:43/225 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LYYATLSPPSRAVLLTAKAIGLDLELRPINLLKGEHLTPEFLKLNPQHTIPTL----IDGEATII 66
            |:....:|....||...:..|:..|.:   |:|.|.      |:.|..|.|.|    :.....:.
Zfish     3 LFIGEGNPHCLKVLAALELSGVRCETQ---LVKHEE------KVVPYLTHPVLPILQLPSGQHLF 58

  Fly    67 DSHAICAYLVEKYGQKEQQLYPKELVQRANVDARLHLDSGHLFA-------RLRFLYEPILYYGS 124
            ..::||.||.:..|||......:.|...|.......|.|..|.|       ....:.||:.:   
Zfish    59 SPNSICQYLFDVSGQKATDATNQWLEWEATNLQPAVLQSLQLVALQGKRVEAAAVMKEPLSW--- 120

  Fly   125 TDCSIDKIAYIQKCWEILEGFLKDQPYLCGSDLTIADFCAVATVTSVNDTAPIDEFKFPKMHAWL 189
            .:.|:.|               :...:|....:::||....|.:..:...:..:......:..|.
Zfish   121 LEQSLSK---------------RKTSFLTDEVVSVADVVLWAALYPLLSDSAFEPGDLQAVRGWF 170

  Fly   190 KRLAELPYYQE-----VNGDGADELKSIFK 214
            :|:..:...|.     :.|.||:.|||..:
Zfish   171 ERVCSVSACQSAALRVLQGKGAEALKSFLQ 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE12NP_001246500.1 GST_N_Delta_Epsilon 4..77 CDD:239343 18/74 (24%)
GstA 6..201 CDD:223698 38/210 (18%)
GST_C_Delta_Epsilon 92..210 CDD:198287 19/129 (15%)
mars1NP_956370.1 GstA 1..173 CDD:223698 36/196 (18%)
GST_N_family 1..67 CDD:238319 16/72 (22%)
GST_C_MetRS_N 75..176 CDD:198340 16/118 (14%)
PRK12268 261..820 CDD:237029
MetRS_core 263..631 CDD:173907
Anticodon_Ia_Met 640..769 CDD:153411
MetRS_RNA 866..910 CDD:238475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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