DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstE12 and gst-34

DIOPT Version :9

Sequence 1:NP_001246500.1 Gene:GstE12 / 37960 FlyBaseID:FBgn0027590 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_741060.2 Gene:gst-34 / 260015 WormBaseID:WBGene00001782 Length:218 Species:Caenorhabditis elegans


Alignment Length:177 Identity:47/177 - (26%)
Similarity:72/177 - (40%) Gaps:48/177 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 FLKL---NPQHTIPTL-IDGEATIIDSHAICAYLVEKYG----QKEQQLYPKELVQRANVDARLH 102
            ||.|   .|....|.| ||| ..:..|.||..||..|:|    ..|.:.:...:|.:    .:.:
 Worm    48 FLALKDKTPFGRFPVLSIDG-FDLAQSTAIHRYLARKFGYAGKSPEDEAFADSIVDQ----VKEY 107

  Fly   103 LDSGHLFARLRFLYEPILY---YGSTDCSIDKI---AYI---QKCWEILEGFLKD--QPYLCGSD 156
            |:|          :.|:||   .|..:..:.:|   .||   ...::||...||:  ..||.|..
 Worm   108 LES----------FRPLLYAQKSGKPEEEVKRIHDEVYIPVKNLLFKILTRILKESKSEYLVGDG 162

  Fly   157 LTIADFCA---VATVTSVNDTAPIDEFKFPKMHAWLKRLAELPYYQE 200
            ||.||...   :.::|::.:..|.|     .:|..||:      |||
 Worm   163 LTWADLVVADHLYSLTNIKELDPED-----PIHLNLKK------YQE 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE12NP_001246500.1 GST_N_Delta_Epsilon 4..77 CDD:239343 14/34 (41%)
GstA 6..201 CDD:223698 47/177 (27%)
GST_C_Delta_Epsilon 92..210 CDD:198287 30/123 (24%)
gst-34NP_741060.2 GST_N_Sigma_like 4..82 CDD:239337 14/34 (41%)
PTZ00057 6..213 CDD:173353 47/177 (27%)
GST_C_Sigma_like 92..200 CDD:198301 31/132 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X30
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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