DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstE12 and vars1

DIOPT Version :10

Sequence 1:NP_611964.1 Gene:GstE12 / 37960 FlyBaseID:FBgn0027590 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_001298275.1 Gene:vars1 / 114427 ZFINID:ZDB-GENE-010601-1 Length:1271 Species:Danio rerio


Alignment Length:216 Identity:43/216 - (19%)
Similarity:82/216 - (37%) Gaps:70/216 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AKAIGLDLELRPINLLKGEHLTPEFLKLNPQHTIPTLIDGEATIIDSHAICAYLVEKYGQKEQQL 86
            :|::|..::  |::::.|..|...:.:|...:..|..|:               ..|.|||..  
Zfish   867 SKSLGNVID--PLDVITGISLEGLYAQLADSNLDPLEIE---------------KAKQGQKSD-- 912

  Fly    87 YPKELVQRANVDARLHLDSGHLFARLRFLYEPILYYGS--TDCSID--KIA----YIQKCWEIL- 142
            ||.. :.....||            |||   .:..|.|  .|.::|  :|.    :..|.|..: 
Zfish   913 YPTG-IPECGTDA------------LRF---ALCAYTSQGRDINLDVNRILGYRHFCNKLWNAVK 961

  Fly   143 -------EGFLK-DQPYLCGSDLTIADFCAVATVTSVNDTAPID----EFKFPKM-----HAWLK 190
                   |||:. ::..||||: :::|...::.:::.  .|..|    .:.||.:     :.||.
Zfish   962 FAMRTLGEGFVPCEKAQLCGSE-SVSDRWILSRLSAA--VALCDGGFKAYDFPTITTAIYNFWLY 1023

  Fly   191 RLAEL------PYYQEVNGDG 205
            .|.::      |.:...:..|
Zfish  1024 ELCDVYLECVKPVFSRTDSKG 1044

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE12NP_611964.1 GST_N_Delta_Epsilon 4..77 CDD:239343 8/54 (15%)
GST_C_Delta_Epsilon 92..210 CDD:198287 29/146 (20%)
vars1NP_001298275.1 GST_C_ValRS_N 80..202 CDD:198327
PTZ00419 291..1270 CDD:240411 43/216 (20%)
Blue background indicates that the domain is not in the aligned region.

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