DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3894 and Neurl4

DIOPT Version :9

Sequence 1:NP_611963.5 Gene:CG3894 / 37959 FlyBaseID:FBgn0035059 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_648688.2 Gene:Neurl4 / 39558 FlyBaseID:FBgn0283503 Length:1780 Species:Drosophila melanogaster


Alignment Length:296 Identity:73/296 - (24%)
Similarity:109/296 - (36%) Gaps:103/296 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PAALCAPSRA-----AYAAAEQEDPDPDQEQDRGRESPIGSLECA------PTLSSRKRQLS--- 63
            |||...|.|.     .|..|.|             .|.:.:.||.      .|:|:......   
  Fly   604 PAANNVPERVYGVIDLYGQAAQ-------------ASIVDTSECGSPDTGNSTISNTTLYSEVPL 655

  Fly    64 RFHPYHGSNIQLGDDATVAYR---RASFADALTFSERPLAPGDIFLVEIEKIERGWSGHMRLGLT 125
            |||..||:|..:.:....|.|   .|.|.||:.||.|||...::|.||:|.:.|.|||::.:|:|
  Fly   656 RFHSIHGANAGISNSGLTASRPNSLAEFNDAIVFSNRPLRQRELFEVELETMVRHWSGNIEIGVT 720

  Fly   126 -------ELAPNVIRTSSEGLPHFALPDLANLGNSWIYPISKFEMNQRQDANDIIEPETDDAPHR 183
                   :||||.  |..|.      .|...|....|     |...:....|.:::.:|      
  Fly   721 GTRPEDIQLAPNA--TDLEA------SDTIILCGPMI-----FHNRKTIRTNILLDLDT------ 766

  Fly   184 NLLGDATHVRTPRGLLPKRLLRPAMGNGNDSDILLTDKGSRIGIIYVPTVQSDSKGELHFIINGV 248
              ||.:|.|             ..|.||:                           .:||.::|:
  Fly   767 --LGPSTRV-------------GVMRNGD---------------------------FIHFFVDGM 789

  Fly   249 DRGPVSRDIPLNRAP-LFVVIDVYGTTKQIRIIQLE 283
            |:||...    ..|| ::.:||:||...|:.:.|.:
  Fly   790 DQGPACE----CHAPNIWAIIDLYGQCAQVSLTQTQ 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3894NP_611963.5 SPRY_NHR_like 64..280 CDD:293945 59/226 (26%)
SOCS_SOCS_like 283..321 CDD:239687 0/1 (0%)
Neurl4NP_648688.2 NEUZ 5..126 CDD:128856
SPRY_NHR_like 8..168 CDD:293945
NEUZ 221..345 CDD:128856
SPRY_NHR_like 225..387 CDD:293945
NEUZ 464..587 CDD:128856
SPRY_NHR_like 467..629 CDD:293945 9/37 (24%)
NEUZ 653..777 CDD:128856 43/157 (27%)
SPRY_NHR_like 656..818 CDD:293945 59/226 (26%)
SPRY_NHR_like 854..1016 CDD:293945
SPRY_NHR_like 1063..1220 CDD:293945
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491552at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12429
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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