DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3894 and Neurl2

DIOPT Version :10

Sequence 1:NP_611963.5 Gene:CG3894 / 37959 FlyBaseID:FBgn0035059 Length:322 Species:Drosophila melanogaster
Sequence 2:XP_063139941.1 Gene:Neurl2 / 311633 RGDID:1306409 Length:316 Species:Rattus norvegicus


Alignment Length:230 Identity:88/230 - (38%)
Similarity:131/230 - (56%) Gaps:17/230 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 SRFHPYHGSNIQLGDDATVAYRRASFADALTFSERPLAPGDIFLVEIEKIERGWSGHMRLGLTEL 127
            :|||..||:||::....|.|.|..|||..:.||..|||||.:||||||:.|.||.||:|||||.|
  Rat    24 TRFHQVHGANIRMDPSGTRATRVESFAHGVCFSREPLAPGQVFLVEIEEKELGWCGHLRLGLTAL 88

  Fly   128 APNVIRTSSEGLPHFALPDLANLGNSWIYPISKFEMNQRQDANDIIEPETDDAPHRNLLGDATHV 192
            .|    .|...:|.|:||||.:||:||::.|::......::.....|......|...|:.....:
  Rat    89 DP----ASLASVPEFSLPDLVSLGHSWVFAITRHHNRVPREGQTEAEAAVPSGPQTLLVEPYLRI 149

  Fly   193 ---RTPRGLLPKRLLRPAMGNG-----NDSDIL-LTDKGSRIGIIYVPTVQSDSKGELHFIINGV 248
               |.||..|..| .||.:.:.     .:.::| .|.:.||:|:::.|  :.|...::|.||||.
  Rat   150 QQFRIPRDRLVGR-SRPGLYSHLLDQLYEQNVLPPTARRSRLGVLFCP--REDGTADMHIIINGE 211

  Fly   249 DRGPVSRDIPLNRAPLFVVIDVYGTTKQIRIIQLE 283
            |.||.:|.:|..: ||:.|:||:.:||.:|::|||
  Rat   212 DMGPSARGLPAAQ-PLYAVVDVFASTKSVRLVQLE 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3894NP_611963.5 SPRY_NHR_like 64..280 CDD:293945 85/224 (38%)
SOCS_SOCS_like 283..321 CDD:239687 1/1 (100%)
Neurl2XP_063139941.1 None

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