DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3880 and sapcd2

DIOPT Version :9

Sequence 1:NP_611962.2 Gene:CG3880 / 37957 FlyBaseID:FBgn0035057 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_998076.1 Gene:sapcd2 / 405847 ZFINID:ZDB-GENE-050128-1 Length:406 Species:Danio rerio


Alignment Length:380 Identity:105/380 - (27%)
Similarity:178/380 - (46%) Gaps:65/380 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LPKQFVLSMKKLFDILDDKQTGYVRFTDIEKGWQDDGSKGLPRGVVDSLRRVTPSSGLLSFERFC 101
            ||:.|:.|::.|||||||::.|:|..::||..|:..|.:.||.||::|||||.|.:|.||||||.
Zfish    34 LPRAFLHSLRTLFDILDDQRRGFVHLSEIESRWRGAGERDLPAGVLESLRRVAPVNGCLSFERFV 98

  Fly   102 AGLKLCLL---------RNQQNAVEDLKLRPRSHGTLAPEMEFHSPAPPPKPPRQVPKSPALGKD 157
            |||:..:.         .:.|...||.::||.....|...:....|.      |..|:..:...|
Zfish    99 AGLRNSMFVPETGSRPAEHPQWRTEDGRVRPLGQSNLVNTLHNRQPG------RGRPRESSAFTD 157

  Fly   158 DIRHALQNWQLNLMADAGKS-----------------KTTQSREQFEHRGSADGGSSSTSASATD 205
              :||:.: :.:....|.:|                 :.|...:..|.|..:.|...|.|.:.|.
Zfish   158 --KHAVSS-RYSAFPVASRSCGVTESSYRSGQDPLQPRPTDPPKHPEQRNESAGLPRSRSETVTG 219

  Fly   206 WSLALPAVPKKTSSKRRESRRHTLQHGIDYNMLKRLKQLEEQRELLLFGLDGVEKARDWYMMQVL 270
            :..:     ::....|.|.||||:..|:||.:||::|:||::::.||.|:|.:::||:|:..|:.
Zfish   220 FMRS-----RRHIRSRDEPRRHTVTSGVDYGLLKQMKELEQEKDSLLAGMDVLDQAREWFQTQIH 279

  Fly   271 NVQEQIKYFGRLGTRFDQWSELQQERLNFQRARVFEANRSLQILADTWEH----------GGYPL 325
            |:.|..:..|:.....:...|..|.||:....::.:.:|.|..|......          ||.| 
Zfish   280 NITETQRLIGQNRHASECLCESAQSRLDVLLPKLQDVSRCLNELISCSGKTLLSSAVPCAGGSP- 343

  Fly   326 HINLAVPTPTVPKPRQMSDLLSR------------VREKPPLLSDLYEAQHSHSH 368
              |.|.|...:...::.:.||::            .:||..|:..|:||:...:|
Zfish   344 --NTAAPPQAIHTLKEHNRLLTQEVMEKSERISQLEQEKCALIKQLFEARAHSAH 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3880NP_611962.2 Suppressor_APC 234..315 CDD:288297 24/80 (30%)
sapcd2NP_998076.1 Suppressor_APC 243..324 CDD:288297 24/80 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1453181at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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