DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp15-31 and UBP12

DIOPT Version :9

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:NP_012338.1 Gene:UBP12 / 853242 SGDID:S000003733 Length:1254 Species:Saccharomyces cerevisiae


Alignment Length:1067 Identity:237/1067 - (22%)
Similarity:390/1067 - (36%) Gaps:337/1067 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 VPPI-GGYQWPA--------DQTPGVMGLKNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKADLK 303
            :.|| |.:.||:        :...|..||.|.||||:||:.||||.|...|.:||:.|.|:.::.
Yeast   338 IKPIEGNHHWPSNYFAYNKLEPASGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEIN 402

  Fly   304 RRNKINSRKFGTKGELTEQLANVLKALW------TCKNESDHSTSFKAVVDRYGTQFRSSTQHDA 362
            ..|.:     |..|.:....:::::.|:      ..:|.:...:.||:.:..:.:.|....|.|:
Yeast   403 EENPL-----GYHGYVARAFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDS 462

  Fly   363 QEFLFWLLDKVHEDLNTASKRRYKSLKNSYGRSDEV--------IAAETLANHIRCNNSFVQAVF 419
            ||||.:|||.:|||||...|:.|.. |.|....|:|        :|.:|...|::.|.|.:..:|
Yeast   463 QEFLAFLLDSLHEDLNRIIKKEYTE-KPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLF 526

  Fly   420 QAQFRSSLTCPRCEKQSNTFDPFHCISVQLPQLTQQTIFVTVVYMTRLPRQVRMGLRVPAGSPIV 484
            ...::|:|.||.|:..|.||||::.:::.||..|.....:.:..|...|  :.:.:.:...|..:
Yeast   527 VGMYKSTLYCPECQNVSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSPP--LLLEVELSKSSTYM 589

  Fly   485 ALREQLQADTGIEG---------SRMVLVDLNAEGFTRVFYDTQPVETLSSIETIYCIEVPAA-- 538
            .|:..:...:|::.         |..:.|:..:......|...|  |.:...:.:...|:|..  
Yeast   590 DLKNYVGKMSGLDPNTLFGCEIFSNQIYVNYESTESNAQFLTLQ--ELIKPADDVIFYELPVTND 652

  Fly   539 ----TPVAKAATPSETGDKSA-----PTAVTPSPAAAQSQADLLLLVANVYRAKDGADI------ 588
                .||..  |..|.|.|:|     |..:|.......:...:.:.:.|.:....|..|      
Yeast   653 NEVIVPVLN--TRIEKGYKNAMLFGVPFFITLKEDELNNPGAIRMKLQNRFVHLSGGYIPFPEPV 715

  Fly   589 ---TRFGAPFSMKAPRDCSYQDLQKRMLREMAPLLKPEV-------FS----------------- 626
               |.|...|.:...:   |.|::....:::......:|       ||                 
Yeast   716 GNRTDFADAFPLLVEK---YPDVEFEQYKDILQYTSIKVTDKDKSFFSIKILSVEKEQQFASNNR 777

  Fly   627 ----YATPLAEMFRIRLQDPSADPDTYLEQVEHPL--LTEMIDMALSVL----------SSEA-- 673
                :.||::::    ..|.:.|.|..||.|...:  .:.::|.|..||          .|||  
Yeast   778 TGPNFWTPISQL----NLDKATDIDDKLEDVVKDIYNYSSLVDCAEGVLMQVDDEGDTEGSEAKN 838

  Fly   674 ---------------------------------------------------GPQHIK-------- 679
                                                               .|:.:.        
Yeast   839 FSKPFQSGDDEENKETVTNNENVNNTNDRDEDMELTDDVEEDASTEPELTDKPEALDKIKDSLTS 903

  Fly   680 -----------LLLEWS---SPEAHFISKQQDTEE-AVVEHESV--ARLSASKPSDTAALTLEQC 727
                       ::.|||   |.||....|..:.|. |.:.::.:  |:|..|...: ..:||:.|
Yeast   904 TPFAILSMNDIIVCEWSELGSNEAFSDDKIYNWENPATLPNKELENAKLERSNAKE-RTITLDDC 967

  Fly   728 LEHYTKAETLSAEDAWRCPHCQQYLPVVKTLGLWSLPDILVVHFKRFRQHQSKGPQAAKLTTMVK 792
            |:.::|.|.|...|:|.||.|:::....|.:.||:.||||::|.|||...:|   .:.|:...|.
Yeast   968 LQLFSKPEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQRS---FSDKIDATVN 1029

  Fly   793 FPLTAFDMSPHLARGVHESASSSLGMGTGIGLGLGLGSNPWKKARSVDSRSSTLNSRCDAKDTRY 857
            ||:|..|:|.::   |::.                                       |.:...|
Yeast  1030 FPITDLDLSRYV---VYKD---------------------------------------DPRGLIY 1052

  Fly   858 DLYAVCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRVSK-VPEDDIEQDIINNEAYMLFYQRRS 921
            |||||..|.|. |..|||||..||..|.:||.|||.||:: .||:.|.     ..||:|||.||.
Yeast  1053 DLYAVDNHYGG-LGGGHYTAYVKNFADNKWYYFDDSRVTETAPENSIA-----GSAYLLFYIRRH 1111

  Fly   922 VDAGECSGSS--------SNSG-DHWVSRIAPASSSSASSTSGKEREPVKLEENTESPAAVEVTE 977
            .| |...|||        |..| |..:.:|..              |.:||.|..::....:|::
Yeast  1112 KD-GNGLGSSKLQEIIQKSRHGYDERIKKIYD--------------EQMKLYEFNKTDEEEDVSD 1161

  Fly   978 KAQSKPVDIVCQDKAKGTADGPDADQEQTTVPHDLQIEELAFADADVDTSLGETIKAEVNLAAKD 1042
            ..      |.|.:..:    .|:.......|.|                                
Yeast  1162 DM------IECNEDVQ----APEYSNRSLEVGH-------------------------------- 1184

  Fly  1043 EPKKVEVEEATPIFAMDEDGSEARQ-----EKKEECVKKEDELSEAPDVSELTAESKTNGHVSSS 1102
                :|.::..     |||.::..:     .:|...:||               ..|.|..:.||
Yeast  1185 ----IETQDCN-----DEDDNDDGERTNSGRRKLRLLKK---------------VYKNNSGLGSS 1225

  Fly  1103 SSSSSSESSLSSRSSPRSLSTSVTAAS 1129
            |:|..||....:..:..:|...||..|
Yeast  1226 STSEISEGCPENEVADLNLKNGVTLES 1252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592 42/126 (33%)
Peptidase_C19 266..>461 CDD:271592 66/208 (32%)
Peptidase_C19R <713..918 CDD:239139 65/205 (32%)
UBP12NP_012338.1 UBP12 99..1111 CDD:227847 198/843 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3835
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000596
OrthoInspector 1 1.000 - - otm46646
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21646
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.860

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