DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp15-31 and DOA4

DIOPT Version :9

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:NP_010354.3 Gene:DOA4 / 851641 SGDID:S000002476 Length:926 Species:Saccharomyces cerevisiae


Alignment Length:829 Identity:153/829 - (18%)
Similarity:234/829 - (28%) Gaps:388/829 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 GSIVSLSSYEAPFI---SSTNNNTTTASNGNNNN-SSSSNINSKRTRALRRSSFRKFLNRIAQHL 184
            |:.:.::..|.|.:   |.|:..|......|:|: :..:.||:|...:..|::..| |.|..|.:
Yeast   449 GNSLPINYPETPHLWKNSETDFMTNQREQLNHNSFAHIAPINTKAITSPSRTATPK-LQRFPQTI 512

  Fly   185 SSTVNVVSEEKHSPANRIAFIEIVPFYTGCWRRKEANKHGQPSVSGSSSGGGGGAGGPGGGERVP 249
            |..:|:.|....|..:.|                      |||....|:...      .....|.
Yeast   513 SMNLNMNSNGHSSATSTI----------------------QPSCLSLSNNDS------LDHTDVT 549

  Fly   250 PIGGYQWPADQTPGVMGLKNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKADLKRRNKINSRKFG 314
            |...:.:..|   ..:||:|.||:|:||.::||:..|..|.:.|:.|.|...:    .||| |.|
Yeast   550 PTSSHNYDLD---FAVGLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHI----NINS-KLG 606

  Fly   315 TKGELTEQLANVLKALWTCKNESDHS-------TSFKAVVDRYGTQFRSSTQHDAQEFLFWLLDK 372
            :||.|.:..|.::..::  |.:.|.|       ..||.......:.|::::|.|.|||..:|||.
Yeast   607 SKGILAKYFARLVHMMY--KEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDG 669

  Fly   373 VHEDLN-------------TASKRRYK-SLKNSYGRSDEVIAAETLANHIRCNNSFVQAVFQAQF 423
            :|||||             .|..||.| ||:        :.::......:..:.|.:..:||.|:
Yeast   670 LHEDLNQCGSNPPLKELSQEAEARREKLSLR--------IASSIEWERFLTTDFSVIVDLFQGQY 726

  Fly   424 RSSLTCPRCEKQSNTFDPFHCISVQLPQLTQQTIFVTVVYMTRLPRQVRMGLRVPAGSPIVALRE 488
            .|.|.|..|...|.|:.||..:|:.:|                                      
Yeast   727 ASRLKCKVCSHTSTTYQPFTVLSIPIP-------------------------------------- 753

  Fly   489 QLQADTGIEGSRMVLVDLNAEGFTRVFYDTQPVETLSSIETIYCIEVPAATPVAKAATPSETGDK 553
                                                                             
Yeast   754 ----------------------------------------------------------------- 753

  Fly   554 SAPTAVTPSPAAAQSQADLLLLVANVYRAKDGADITRFGAPFSMKAPRDCSYQDLQKRMLREMAP 618
                                                                             
Yeast   754 ----------------------------------------------------------------- 753

  Fly   619 LLKPEVFSYATPLAEMFRIRLQDPSADPDTYLEQVEHPLLTEMIDMALSVLSSEAGPQHIKLLLE 683
                                                                             
Yeast   754 ----------------------------------------------------------------- 753

  Fly   684 WSSPEAHFISKQQDTEEAVVEHESVARLSASKPSDTAALTLEQCLEHYTKAETLSAEDAWRCPHC 748
                                           |.:....:|:|.|...:||.|.|..::.|.||||
Yeast   754 -------------------------------KKNSRNNITIEDCFREFTKCENLEVDEQWLCPHC 787

  Fly   749 QQYLPVVKTLGLWSLPDILVVHFKRFRQHQSKGPQAAKLTTMVKFPLTAFDMSPHLAR------- 806
            ::..|..|.|.:..||..|:||.|||....:|.      ...|.:|. ..|::|..|.       
Yeast   788 EKRQPSTKQLTITRLPRNLIVHLKRFDNLLNKN------NDFVIYPF-LLDLTPFWANDFDGVFP 845

  Fly   807 -GVHESASSSLGMGTGIGLGLGLGSNPWKKARSVDSRSSTLNSRCDAKDTRYDLYAVCYHQGDTL 870
             ||::                                 ..|..|......:|:||.|..|.| ||
Yeast   846 PGVND---------------------------------DELPIRGQIPPFKYELYGVACHFG-TL 876

  Fly   871 ETGHYTAACKNPYDRQWYKFDDQRVSKVPEDDIEQDIINNEAYMLFYQR 919
            ..|||||..|....:.|..|||.:...|..   :.|.||:.||:|||.|
Yeast   877 YGGHYTAYVKKGLKKGWLYFDDTKYKPVKN---KADAINSNAYVLFYHR 922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592 44/140 (31%)
Peptidase_C19 266..>461 CDD:271592 63/215 (29%)
Peptidase_C19R <713..918 CDD:239139 60/212 (28%)
DOA4NP_010354.3 RHOD 208..324 CDD:197731
COG5533 495..924 CDD:227820 142/783 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21646
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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