DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp15-31 and usp19

DIOPT Version :9

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:XP_012816883.1 Gene:usp19 / 780341 XenbaseID:XB-GENE-5869969 Length:1478 Species:Xenopus tropicalis


Alignment Length:851 Identity:218/851 - (25%)
Similarity:325/851 - (38%) Gaps:261/851 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 PGVMGLKNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKADLKRRNKINSRKFGTKGELTEQLANV 326
            ||..||.|.|||||||:|:|.||:|..|.:||....:::::...|.:     ||.|.|....|.:
 Frog   636 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDYFQDRSFESEINCNNPL-----GTGGRLAVSFAVL 695

  Fly   327 LKALWTCKNESDHSTSFKAVVDRYGTQFRSSTQHDAQEFLFWLLDKVHEDLNTASKRRYKSLKNS 391
            |:|||...:.:...:..||:|....:||....|||||||:.:|||.:|||||....:.|....:|
 Frog   696 LRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDS 760

  Fly   392 YGRSDEVIAAETLANHIRCNNSFVQAVFQAQFRSSLTCPRCEKQSNTFDPFHCISVQLPQLTQQT 456
            .||.||.:|.|....|...|:|||..:||.|::|.|.||.|.|.|.|||||..:.|.|||  :|.
 Frog   761 DGRPDEEVADEAWLRHKMRNDSFVVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPVPLPQ--KQK 823

  Fly   457 IFVTVVYMTRLPRQVRMGLRV---PAGSPIVALREQLQADTGIEGSRMVLVDLNAEGFTRVFYDT 518
            : :||.|..|.|.:..:...|   ...|....:.|.:.....::...:.|.::....|.|:|..:
 Frog   824 V-LTVYYFAREPHKKPIKFLVSISKENSSAAEVLESISKSVRVKAENLQLAEVVKNRFQRIFRPS 887

  Fly   519 QPVETLSSIETIYCIEVPA--------------------ATPVAKAAT----------------- 546
            ..::::|..:.::|.||.:                    :.|:.|.|.                 
 Frog   888 CSLDSVSPNDLLFCFEVLSKELSKERVVVFQVQQRPQVPSIPITKCAACQKKQMSEEEKLKRCTR 952

  Fly   547 ----------------------------------------------------------------- 546
                                                                             
 Frog   953 CYRVGYCNQVCQKSHWPDHKTACRPENIGYPFLISVPESRLTYSRLAQLLEGYARYSVNVFQPPF 1017

  Fly   547 -PSETGDKSAPTAVTPSPAAAQSQADLLLLVANVYRAKD--------------------GADITR 590
             |..|....||..::...|....|:||.||..:....||                    |.....
 Frog  1018 IPGRTSPDHAPQPLSSEKADLPPQSDLPLLGESSEEEKDFHSVQSSQTTLPPLTCLSASGDSGIV 1082

  Fly   591 FGAPFSMKA---PRDCSYQDLQKRMLREM----------APLLKPEV----FSYATPL---AEMF 635
            .|.|...:.   ..|..:.:.....:|||          ...:|||.    |..:..:   |..|
 Frog  1083 HGKPPGDRVSLYSTDSGFSEHSTDTVREMDSGGEKETIYEKSVKPEAAVAGFQQSESVNVHASAF 1147

  Fly   636 RIRLQDPSADPDTYLEQVEHPL-LTEMIDMALSVLSSEAGPQHIKLLLEWSSPEAHFISKQQDTE 699
            .|.:.||:.......::.|.|| |||...:||...::|...:.:  |:|         ||:.:.|
 Frog  1148 YINVIDPNNKEMKLEDKGESPLELTEDCSLALVWKNNERAKEFV--LVE---------SKELECE 1201

  Fly   700 EAVVEHESVARLSASKPSDTAALTLEQCLEHYTKAETLSAEDAWRCPHCQQYLPVVKTLGLWSLP 764
            |...        |||:.:.....||:|||..:||.|.|:.|:||.||.|.|:....|.|.||.||
 Frog  1202 EDPG--------SASEAARAGLFTLDQCLNLFTKPEVLAPEEAWYCPKCNQHREASKQLMLWRLP 1258

  Fly   765 DILVVHFKRF-------RQHQSKGPQAAKLTTMVKFPLTAFDMSPHLARGVHESASSSLGMGTGI 822
            :||::..|||       |.         |:..||.||:                           
 Frog  1259 NILIIQLKRFSFRTFIWRD---------KINDMVDFPV--------------------------- 1287

  Fly   823 GLGLGLGSNPWKKARSVDSRSSTLNSRCDAKDTRYDLYAVCYHQGDTLETGHYTAACKNPYDRQ- 886
                          |::|..:..:..:.|.:...||||||..|.|..: .|||||..:.|.::. 
 Frog  1288 --------------RNLDLSTFCIGQKEDHQRPIYDLYAVINHYGGMI-GGHYTAYARLPNEKNS 1337

  Fly   887 ------WYKFDDQRVSKVPEDDIEQDIINNEAYMLFYQRRS---------------VDAG---EC 927
                  |..|||..|:.|.    |..::...||:|||:||:               ||||   :.
 Frog  1338 QRSDVGWRLFDDSTVTTVD----ESQVVTRYAYVLFYRRRNSPVERPMRGHPADRRVDAGASADV 1398

  Fly   928 SGSSSN 933
            :||.::
 Frog  1399 AGSQAS 1404

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592 50/120 (42%)
Peptidase_C19 266..>461 CDD:271592 81/194 (42%)
Peptidase_C19R <713..918 CDD:239139 63/218 (29%)
usp19XP_012816883.1 p23_like 53..135 CDD:107220
p23_CS_SGT1_like 435..515 CDD:107223