DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp15-31 and Usp19

DIOPT Version :9

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:XP_006511895.1 Gene:Usp19 / 71472 MGIID:1918722 Length:1361 Species:Mus musculus


Alignment Length:1186 Identity:278/1186 - (23%)
Similarity:426/1186 - (35%) Gaps:368/1186 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EGDAATTHLTTTATATTGAIVAAGVTTTLPATKTTTTAADTSTTNAAKKIRRTFSMPRNPFRWTR 76
            :|| |.:.|:.:||.     |.|......|...|.|:...:..:.|...:.:|.| |||.     
Mouse   228 QGD-APSFLSDSATQ-----VEAEEKLCAPPMNTQTSLLSSEKSLALLTVEKTVS-PRND----- 280

  Fly    77 KFKTAVAVTSSAGAENDNESGKNNGARERRGSHTAISSCVGGGRGRSGSIVSLSSYEAPFISSTN 141
                  .|......:.|.|..:.:..:|.                     ::|.:.....:....
Mouse   281 ------PVAPVMVQDRDPEPEQEDQVKEE---------------------MALGADPTALVEEPE 318

  Fly   142 N--NTTTASNGNNNNSSSSNINSKRTRALRRSS----FRK------FLNRIAQHL-------SST 187
            :  |.....|.:......|.:.....:.:||.|    ||:      |..|....|       ..|
Mouse   319 SMVNLAFVKNDSYEKGPDSVVVHVYVKEIRRDSSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHT 383

  Fly   188 V--------NVVSEEKHSPANRIAFIEIVPFYTGCWRRKEANKHG---QPSVSGSSSGG------ 235
            :        |::..|:.:.....:.|:|      |.|::::.:.|   .|:..|:..|.      
Mouse   384 IFRWQVKLRNLIEPEQCTFCFTASRIDI------CLRKRQSQRWGGLEAPATRGAVGGAKVAVPT 442

  Fly   236 ----------GGG------------------------AGGPGGGERVP----------------- 249
                      |||                        :|..|...|.|                 
Mouse   443 GPTPLDSTPPGGGPHPLTGQEEARAVEKEKPKARSEDSGLDGVVARTPLEHVAPKPDPHLASPKP 507

  Fly   250 ----------PIGGYQWPADQ-------TPGVMGLKNHGNTCFMNAVLQCLSHTDILAEYFVLDQ 297
                      |:.|.....|:       .||..||.|.|||||||:|:|.||:|..|.::|....
Mouse   508 TCMVPPMPHSPVSGDSVEEDEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRS 572

  Fly   298 YKADLKRRNKINSRKFGTKGELTEQLANVLKALWTCKNESDHSTSFKAVVDRYGTQFRSSTQHDA 362
            ::|::...|.:     ||.|.|....|.:|:|||...:::...:..||:|....:||....||||
Mouse   573 FEAEINYNNPL-----GTGGRLAIGFAVLLRALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDA 632

  Fly   363 QEFLFWLLDKVHEDLNTASKRRYKSLKNSYGRSDEVIAAETLANHIRCNNSFVQAVFQAQFRSSL 427
            |||:.:|||.:|||||....:.|....:|.||.|||:|.|....|...|:||:..:||.|::|.|
Mouse   633 QEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKL 697

  Fly   428 TCPRCEKQSNTFDPFHCISVQLPQLTQQTIFVTVVYMTRLPRQVRMGLRVPA---GSPIVALREQ 489
            .||.|.|.|.|||||..:.|.|||  :|.: :.:.|..|.|....:...|..   .|....:.:.
Mouse   698 VCPVCAKVSITFDPFLYLPVPLPQ--KQKV-LPIFYFAREPHSKPIKFLVSVSKENSSASEVLDS 759

  Fly   490 LQADTGIEGSRMVLVDLNAEGFTRVFYDTQPVETLSSIETIYCIEVPAATPVAKAATPSETGDKS 554
            |.....::...:.|.::....|.|||..:..::.:|..:.:.|.|:.:.....:.....|...:.
Mouse   760 LSQSVHVKPENLRLAEVIKNRFHRVFLPSHSLDAVSPTDVLLCFELLSPELAKERVVVLEVQQRP 824

  Fly   555 APTAVTPSPAAA-----QSQADLLLLVANVYRA------------KDGADITR---FGAPFSMKA 599
            ...::..|..||     ||:.:.|......||.            .|...:.|   .|.||.:..
Mouse   825 QVPSIPISKCAACQRKQQSEEEKLKRCTRCYRVGYCNQFCQKTHWPDHKGLCRPENIGYPFLVSV 889

  Fly   600 PRDCSYQDLQKRMLREMAPLLKPEVFSYATPLAEMFR---------------------------- 636
            |       ..:.....:|.||:    .||.....:|:                            
Mouse   890 P-------ASRLTYARLAQLLE----GYARYSVSVFQPPFQPGRMALESQSPGCTTLLSTSSLEA 943

  Fly   637 ------------IRLQDPSADPDTYLEQVEHPLLTEMIDMALSVLSSE---AGP-QHIKLLL--E 683
                        ::|..|.|:.||...:|..|.....:. :.|.||||   :|| :...||.  .
Mouse   944 GDSEREPIQPSELQLVTPVAEGDTGAHRVWPPADRGPVP-STSGLSSEMLASGPIEGCPLLAGER 1007

  Fly   684 WSSPEAHFISKQQDTEEAVVEHE-------------------------------SVA-------R 710
            .|.||| .:...|.:.|:|..|.                               |:|       |
Mouse  1008 VSRPEA-AVPGYQHSSESVNTHTPQFFIYKIDASNREQRLEDKGETPLELGDDCSLALVWRNNER 1071

  Fly   711 L------------------SASKPSDTAALTLEQCLEHYTKAETLSAEDAWRCPHCQQYLPVVKT 757
            |                  ||.:.:.....||:|||..:|:.|.|:.|:||.||.|:|:....|.
Mouse  1072 LQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQ 1136

  Fly   758 LGLWSLPDILVVHFKRF-------RQHQSKGPQAAKLTTMVKFPLTAFDMSPHLARGVHESASSS 815
            |.||.||::|:|..|||       |.         |:..:|:||:...|:|...           
Mouse  1137 LLLWRLPNVLIVQLKRFSFRSFIWRD---------KINDLVEFPVRNLDLSKFC----------- 1181

  Fly   816 LGMGTGIGLGLGLGSNPWKKARSVDSRSSTLNSRCDAKDTRYDLYAVCYHQGDTLETGHYTAACK 880
                  ||          :|...:.|               ||||||..|.|..: .|||||..:
Mouse  1182 ------IG----------QKEEQLPS---------------YDLYAVINHYGGMI-GGHYTACAR 1214

  Fly   881 NPYDRQ-------WYKFDDQRVSKVPEDDIEQDIINNEAYMLFYQRRSVDAGECSGSSSNSGDHW 938
            .|.||.       |..|||..|:.|.    |..::...||:|||:||:... |....:|:|..| 
Mouse  1215 LPNDRSSQRSDVGWRLFDDSTVTTVD----ESQVVTRYAYVLFYRRRNSPV-ERPPRASHSEHH- 1273

  Fly   939 VSRIAPASSSSASSTS 954
             ..:.||:.::||..|
Mouse  1274 -PDLGPAAEAAASQAS 1288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592 50/120 (42%)
Peptidase_C19 266..>461 CDD:271592 81/194 (42%)
Peptidase_C19R <713..918 CDD:239139 65/218 (30%)
Usp19XP_006511895.1 p23_like 58..140 CDD:107220
p23_CS_SGT1_like 329..425 CDD:107223 17/101 (17%)
USP19_linker 416..538 CDD:374662 14/121 (12%)
UBP12 <536..1258 CDD:227847 214/798 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1283205at2759
OrthoFinder 1 1.000 - - FOG0000596
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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