DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp15-31 and usp11

DIOPT Version :10

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:XP_002663119.3 Gene:usp11 / 568334 ZFINID:ZDB-GENE-081104-421 Length:990 Species:Danio rerio


Alignment Length:863 Identity:224/863 - (25%)
Similarity:342/863 - (39%) Gaps:262/863 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 WP----------ADQ-----TPGVMGLKNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKADLKRR 305
            ||          ||:     .|||.||.|.|||||||:.|||||:|..|.|||:.:.|..:|...
Zfish   218 WPTSRPQIMRNSADEDSYRGPPGVCGLTNLGNTCFMNSALQCLSNTPPLTEYFLKNLYLEELNFS 282

  Fly   306 NKINSRKFGTKGELTEQLANVLKALWTCKNESDHSTSFKAVVDRYGTQFRSSTQHDAQEFLFWLL 370
            |.:     |.|||:.|..|:|:|.:|:.::.|.....||..|..:.:||....|||:||.|.:||
Zfish   283 NPL-----GMKGEIAEAYADVIKQMWSGRHYSVVPRVFKTKVGHFASQFLGYQQHDSQELLSFLL 342

  Fly   371 DKVHEDLNTASKRRYKSLKNSYGRSDEVIAAETLANHIRCNNSFVQAVFQAQFRSSLTCPRCEKQ 435
            |.:|||||...|:.|..|:::.||.|:.:|.|...||:|.|:|.:...|...|:|:|.||.|.|.
Zfish   343 DGLHEDLNRVKKKEYIELRDADGRPDQEVAEEAWRNHLRRNDSVIVDTFHGLFKSTLVCPECNKV 407

  Fly   436 SNTFDPFHCISVQLPQLTQQTIFVTVVYM--TRLPRQVRMGLRVPAGSPIVALREQLQADTGIEG 498
            |.|||||..:||.||...::.:.|..|.:  |..|.|.|  |.||....::.|...|...||:..
Zfish   408 SVTFDPFCYLSVPLPVSKERVMEVFYVSLDPTAKPTQYR--LIVPKAGRVLDLCTALSQATGVPP 470

  Fly   499 SRMVLVDLNAEGFTRVFYDTQPVETLSSIETIYCIEVPAATPVAKAATPSETGDKSAPTAVTPSP 563
            ::|.:.|:....|.|::...:.:..:...:.|:..::       .:....|..|:          
Zfish   471 NQMTVTDVFNHRFYRIYQSDESLSCILDRDDIFVYQL-------SSGCVDEDSDE---------- 518

  Fly   564 AAAQSQADLLLLVANVYRAK--------DGAD---ITRFGAPFSMKAPR-DCSYQDLQKRMLREM 616
                       :|.::|..:        .|::   .:.||.|..|..|| .|:.:.|.:.:|..:
Zfish   519 -----------VVLSIYMRERSHYRDYGSGSNSYGTSLFGHPLRMSVPRAHCTPEHLYQLLLERL 572

  Fly   617 APLLKP----------------EVF---------------------------------------- 625
            |..::|                |::                                        
Zfish   573 ARYVRPLDPSEEVEEEEEDDEEELYKAQTNGVSDDEGEEDSEEAGSSKKEEEPRASNEVNEQNNG 637

  Fly   626 -SYATPLAEMFRIRLQDPSA-------------------------------------DPDTYLEQ 652
             |.|:|.:|......::.|:                                     |.|...|.
Zfish   638 QSEASPSSEGEERAEEEESSSEQERGSSTEEGQSACGSTDTTDGDQSAGAEPSGKEEDEDEEEED 702

  Fly   653 VE-----------HP---LLTEMIDMALSVLS------------SEAG-----PQHIKLLLEWSS 686
            .|           ||   ..||....||..:.            :|||     .....:.::| .
Zfish   703 GEEAASCTPANKRHPGRRRYTERRKKALFTIQAVNSNGTTERGMAEAGGSISFSSQPYIAIDW-D 766

  Fly   687 PEAHFISKQQDTEEAVVEHESVARLSASKPSDTAALTLEQCLEHYTKAETLSAEDAWRCPHCQQY 751
            |:.......::..|..::|:|:     ..|.....:.|::|:|.:|..|||..|:.|.||.|:::
Zfish   767 PDMKKKYYNENEAEKYIKHQSM-----DVPHQQTTVQLQECIELFTTVETLEEENPWYCPTCKRH 826

  Fly   752 LPVVKTLGLWSLPDILVVHFKRFRQHQSKGPQAAKLTTMVKFPLTAFDMSPHLARGVHESASSSL 816
            ....|.|.|||||::|::|.|||...:.   ...||.|:|:|||...|.|..|.:          
Zfish   827 QLATKKLDLWSLPEVLIIHLKRFSYTKY---SREKLDTIVEFPLRDLDFSGFLLK---------- 878

  Fly   817 GMGTGIGLGLGLGSNPWKKARSVDSRSSTLNSR---CDAKDTRYDLYAVCYHQGDTLETGHYTAA 878
                                       .|:||.   |.     |||.:|..|.|. |..||||:.
Zfish   879 ---------------------------KTVNSTEPPCP-----YDLISVSNHYGG-LRDGHYTSY 910

  Fly   879 CKNPYDRQWYKFDDQRVSKVPEDDIEQDIINNEAYMLFYQRR------SVDAG-ECSGSSSNSGD 936
            .:|..:.|||.|||.:|:...    |:.|:.:.||:|||||:      ||... .||....|   
Zfish   911 ARNKDNGQWYYFDDSKVTYAR----EEQIVTSAAYLLFYQRQDKIRQPSVPPPVPCSTQPEN--- 968

  Fly   937 HWVSRIAPASSSSASSTS 954
                .|:..::.||...|
Zfish   969 ----HISSQTNDSADGAS 982

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 UBP12 <255..921 CDD:227847 215/827 (26%)
usp11XP_002663119.3 UBP12 15..947 CDD:227847 213/819 (26%)

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