DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp15-31 and Usp1

DIOPT Version :9

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:NP_001263061.1 Gene:Usp1 / 43462 FlyBaseID:FBgn0028476 Length:1078 Species:Drosophila melanogaster


Alignment Length:1045 Identity:192/1045 - (18%)
Similarity:329/1045 - (31%) Gaps:353/1045 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 FYTGCWRRKEANKHG---QPSVSGSSS----------------GGGGGAGGPGGGERVPPIGGYQ 255
            |.|....|:.||.:|   ..||:||||                .||..|.|.|.|     :.|..
  Fly   246 FQTTTEERRVANGYGGNAARSVTGSSSNEIESQEPQSHQYYGPNGGSNAAGAGAG-----LNGSA 305

  Fly   256 WPADQTPGVMGLKNHGNTCFMNAVLQCLSHTDILAEYFV-------------------------- 294
            ...:..|.:..|.|.||:|::|:|:..|.    .|.:|:                          
  Fly   306 AALNHAPSMGTLCNIGNSCYLNSVVYTLR----FAPHFLHNLHHLIQDLNVVQQTIVRQQTARSA 366

  Fly   295 -------------------------LDQYKADLKRRNKINSRKFG------TKGELTEQLANVLK 328
                                     .|||..   :...:||...|      |...:||:|..:..
  Fly   367 SLGKNVSAAQLEHARSWSSKDLATSTDQYSG---QNGGVNSGNGGSGSSKSTHQSVTEKLHELYN 428

  Fly   329 AL----WTCKNESDHSTSFKAVVDRYGTQFRSSTQHDAQEFLFWLLDKVHEDLNTASKRRYKSLK 389
            .|    .....|..|:.:....:......|..:.|.||.|||..:|:.:.|        ..:||.
  Fly   429 NLHGNEMADSTEPYHADTLLHAIQDVNATFEGNQQQDAHEFLMCVLNCIRE--------TNQSLI 485

  Fly   390 NSYGRSDEVIAAETLANHIRCNNSFVQAVFQAQFRSSLTCPRCEKQSNTFDPFHCISVQLPQLTQ 454
            .:.|...||||...:||....:..      :.|.|:..|..:.....|.           ...|.
  Fly   486 KAIGECPEVIANGYIANPDEVDTG------EGQDRTDSTASQNLNAGNG-----------SLATS 533

  Fly   455 QTIFVTVVYMTRLPR---QVRMGLRVPAGSPIVALREQLQADTGIEGSRMVLVDLNAEGFTRVFY 516
            ||......:.:|..:   :|:........||   |:|......||.|:.......|:     :||
  Fly   534 QTTTTKTSFFSRKSKRKDEVKPSKSTRVQSP---LKENSPTAGGITGAGTAHATANS-----LFY 590

  Fly   517 DTQPVETLSSIETIYCIEVPAATPVAKAATPSETGDKSAPTAVTPSPAAAQSQADLLLLVANVYR 581
                         :..:::..|:..:.:|:.|.:|..|...|:...|.|.:..:|..:..|.|.:
  Fly   591 -------------LNTVDLSGASSTSGSASTSASGVVSTSAALPTPPQATKYSSDDEMNSATVLK 642

  Fly   582 AKDGADITRFGAPFSMKAPRDCSYQDLQKRMLREMAPLLKPEVFSYATPLAEMFRIRLQDPSADP 646
            .|                      ..|::| :||                     :.|...|:| 
  Fly   643 DK----------------------MRLEER-IRE---------------------LNLNFFSSD- 662

  Fly   647 DTYLEQVEHPLLTEMIDMALSVLSSEAGPQHIKLLLEWSSP---EAHFISKQQDTEEAVVEHESV 708
                       ...::.:....||.|...:..:.:|:.|.|   ..:..:..||.....:::..:
  Fly   663 -----------FEGIVVLTTKCLSCETITRQKQGMLDISVPVPISGYDNADLQDKPSTYIQNSCI 716

  Fly   709 ARLSASKPSDTAALTLEQCLEHYTKAETLSAEDAWRCPHCQQYLPVVKTLGLWSLPDILVVHFKR 773
            .:                        |....|:.:.|..|..|...::::....||.:||:...|
  Fly   717 TK------------------------EYFRGENKYSCNQCTGYTEAIRSISYEVLPRLLVIQLNR 757

  Fly   774 FRQHQSKGPQAAKLTTMVKFPLTAFDMSPHLARGVHESASSSLGMGTGIGLGLGLGSNPWKKARS 838
            |    |.|.:.........|.|..|             .::...:|.|..|.:            
  Fly   758 F----SGGMEKVSTYVPTTFTLPCF-------------CATCCELGEGNKLHV------------ 793

  Fly   839 VDSRSSTLNSRCDAKDTRYDLYAVCYHQGDTLETGHYTA-AC---------KNPYDRQWYKFDDQ 893
                              |.||:|..|.|.||..|||.| .|         ..|.||:....:.|
  Fly   794 ------------------YKLYSVITHVGATLTVGHYIAYTCFLDLASDYVNCPKDRRNTMTNSQ 840

  Fly   894 RVSKVPEDDIEQDIINNEAYMLFYQRRSVDAGECSGSSSNSGDHWVSRIAPASSS---------- 948
            .::       .|.:.:||           :|...:||||.:....::..:..:||          
  Fly   841 TMA-------SQAVPSNE-----------NAAPNNGSSSVASTPVIAAASALASSGNILMKKMKF 887

  Fly   949 --SASSTSGKEREPVK-----LEEN-TESPAAVEVTEKAQSK---PVDIVCQDKAKGTADGPDAD 1002
              |.:|:||...:.||     :.:| |.....:.::...|..   .:.:.|..:...:.....:|
  Fly   888 GRSKASSSGDMSKNVKQVNGIISKNITNGIGKLSISTTCQGVNCCAMRLCCTQQTSSSNSTSCSD 952

  Fly  1003 QEQTTVPHDLQIEELAF--ADADVDTSLGET----IKAEVNLAAKDEPKKVEVEEATPIFAM-DE 1060
            ..:.::.:... ..|:|  :.:...|..|.|    ::|.......|           ||:.| |:
  Fly   953 FSEESLQNGSN-SNLSFGGSGSTYPTGYGSTGRGGVRANYAHGGPD-----------PIWYMCDD 1005

  Fly  1061 DGSEARQEKK-EECVKKEDELSEAP--------DVSELTAE-----SKTNGHVSSSSSSSSSESS 1111
            |..:|..::: ||.:....:::..|        |:....|.     |.|.....||:.||.|..:
  Fly  1006 DKIKAMTQREFEELLSPTRKITITPYLLFYARFDLQPQKATPPMPGSSTTPPPPSSAQSSWSNEN 1070

  Fly  1112 LSSRS 1116
            :||.|
  Fly  1071 VSSGS 1075

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592 33/181 (18%)
Peptidase_C19 266..>461 CDD:271592 48/255 (19%)
Peptidase_C19R <713..918 CDD:239139 39/214 (18%)
Usp1NP_001263061.1 Peptidase_C19 308..819 CDD:271592 120/690 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456834
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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