DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp15-31 and not

DIOPT Version :9

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:NP_001287106.1 Gene:not / 40030 FlyBaseID:FBgn0013717 Length:496 Species:Drosophila melanogaster


Alignment Length:676 Identity:120/676 - (17%)
Similarity:195/676 - (28%) Gaps:344/676 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 DQTPGVMGLKNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKADLKRRNKI----NSRKF-----G 314
            :||.|:.||.|.|.|||||.::|.|.||.:|::||:.|::....|..:|.    .||.|     |
  Fly   152 NQTIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGSKSSHKCLVCEVSRLFQEFYSG 216

  Fly   315 TKGELTEQLANVLKALWTCKNESDHSTSFKAVVDRYGTQFRSSTQHDAQEFLFWLLDKVHEDLNT 379
            ::..|:  |..:|..:|   |.:.|...::              |.||.||....||.:|... .
  Fly   217 SRSPLS--LHRLLHLIW---NHAKHLAGYE--------------QQDAHEFFIATLDVLHRHC-V 261

  Fly   380 ASKRRYKSLKNSYGRSDEVIAAETLANHI--RCNNSFVQAVFQAQFRSSLTCPRCEKQSNTFDPF 442
            .:|..::|..||.|......::.:.::|.  :| |..:..:|....:|.:.|..|...|.|:|||
  Fly   262 KAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQC-NCIIDQIFTGMLQSDVVCQACNGVSTTYDPF 325

  Fly   443 HCISVQLPQLTQQTIFVTVVYMTRLPRQVRMGLRVPAGSPIVALREQLQADTGIEGSRMVLVDLN 507
            ..||:.|                                                          
  Fly   326 WDISLDL---------------------------------------------------------- 332

  Fly   508 AEGFTRVFYDTQPVETLSSIETIYCIEVPAATPVAKAATPSETGDKSAPTAVTPSPAAAQSQADL 572
                                                       |:.:....|||.          
  Fly   333 -------------------------------------------GETTTHGGVTPK---------- 344

  Fly   573 LLLVANVYRAKDGADITRFGAPFSMKAPRDCSYQDLQKRMLREMAPLLKPEVFSYATPLAEMFRI 637
                                                                             
  Fly   345 ----------------------------------------------------------------- 344

  Fly   638 RLQDPSADPDTYLEQVEHPLLTEMIDMALSVLSSEAGPQHIKLLLEWSSPEAHFISKQQDTEEAV 702
                                                                             
  Fly   345 ----------------------------------------------------------------- 344

  Fly   703 VEHESVARLSASKPSDTAALTLEQCLEHYTKAETLSAEDAWRCPHCQQYLPVVKTLGLWSLPDIL 767
                                ||..|||.||:||.|.:....:|..|:.|....|...|.:||.::
  Fly   345 --------------------TLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVV 389

  Fly   768 VVHFKRFRQHQSKGPQAAKLTTMVKFPLTAFDMSPHLARGVHESASSSLGMGTGIGLGLGLGSNP 832
            ..|.||| :|.:...:  |:::.::||: .|||:|.::     ...::.|               
  Fly   390 SFHLKRF-EHSALIDR--KISSFIQFPV-EFDMTPFMS-----EKKNAYG--------------- 430

  Fly   833 WKKARSVDSRSSTLNSRCDAKDTRYDLYAVCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRVSK 897
                                 |.|:.||||..|.| |::||||||..::..| .|.|.||..::.
  Fly   431 ---------------------DFRFSLYAVVNHVG-TIDTGHYTAYVRHQKD-TWVKCDDHVITM 472

  Fly   898 VPEDDIEQDIINNEAYMLFYQRRSVD 923
            .   .::| ::::|.|:|||.:..::
  Fly   473 A---SLKQ-VLDSEGYLLFYHKNVLE 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592 38/129 (29%)
Peptidase_C19 266..>461 CDD:271592 57/205 (28%)
Peptidase_C19R <713..918 CDD:239139 55/204 (27%)
notNP_001287106.1 zf-UBP 46..103 CDD:307999
Peptidase_C19D 158..489 CDD:239125 116/663 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456859
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21646
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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