DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp15-31 and scny

DIOPT Version :9

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster


Alignment Length:795 Identity:153/795 - (19%)
Similarity:260/795 - (32%) Gaps:257/795 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 SETGDKSAPTAVTPSPAAAQSQADLL---LLVAN---------VYRAKDGADITRFGAPFSMKAP 600
            :|.|......|:|.:..|.||....:   |:.:.         |.|.:|..:..||     :...
  Fly   213 AEPGSGCIICAMTKTLLATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRF-----LVEA 272

  Fly   601 RDCSYQDLQKRMLREMAPLLKPEVFSYATPLAEMFRIRLQDPSADPDTYLEQVEHPLLTEMIDMA 665
            .:.:|. ::.|..:|:..|:|.     .|||.::|           ..||......|....:.:.
  Fly   273 MERAYL-MRFRNYKELDQLVKE-----TTPLGQIF-----------GGYLRSEVRCLSCNHVSIT 320

  Fly   666 LSVLSSEAGPQHIK-LLLEWSSPEAHFISKQQDTEEAVVEHESVARLSASKPSDTAALTLEQCLE 729
            .         ||.: |||:        |.|....|:|...|.|..||                  
  Fly   321 F---------QHFQDLLLD--------IRKADSLEDAFEGHFSRERL------------------ 350

  Fly   730 HYTKAETLSAED-AWRCPHCQQYLPVVKTLGLWSLPDILVVHFKRFRQHQSKGPQAAKLTTMVKF 793
                      || .::|..|::.:...|...|...|..|.:..|||....:      |||..:.|
  Fly   351 ----------EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN------KLTKQISF 399

  Fly   794 PLTAFDMSPHLARGVHESASSSLGMGTGIGLGLGLGSNPWKKARSVDSRSSTLNSRCDAKDTRYD 858
            . :..|:|.:.||                                        :....|:...|.
  Fly   400 K-SRIDLSKYAAR----------------------------------------SQAAQAQPLTYR 423

  Fly   859 LYAVCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRVSKVPEDDIEQDIINNEAYMLFYQRRSVD 923
            |.::..|.|.:...|||||..... ...:|.|||..|..:    ....:.|..||::|::   :|
  Fly   424 LVSMVTHLGASQHCGHYTAIGSTD-TGSFYNFDDSYVRPI----AMHSVCNTNAYIMFFE---LD 480

  Fly   924 AGECSGSSSN-------SGDHWVSRIAPASSSSASSTS--GKEREPVKLEENTESPA---AVEVT 976
            ..:.:..::|       :..|..:.:..|:.||.|.|.  |.:.........|...|   |::..
  Fly   481 LSQAASPAANRPNGVRLTNGHSTTPVPAATVSSPSPTRFIGPQLPAGGANGYTNGNAQKTAIQFK 545

  Fly   977 EKAQSKPVDIV------CQDKAKGTADGPDADQEQTTVPHDLQIEELAFADADVDTSLGETIKAE 1035
            ::.|..|.:.:      .||.||....|..|..|.|:.|                |:.|....:.
  Fly   546 QQNQQSPQNGLQLGTGKFQDTAKPPLVGAHAKGEATSAP----------------TANGNKSSSP 594

  Fly  1036 VNLAAKDEPKKVEVEEATPIFAMDEDGSEARQEKKEECVKKEDELSEAPDVSEL-TAESKTNGHV 1099
            .:.::.:. |.:..::..||.:.|||              .|||:...|..::| :..:.|..|.
  Fly   595 SSNSSSNH-KSINQQQYLPISSDDED--------------IEDEMKPRPTTAQLPSMPNMTENHT 644

  Fly  1100 SSSSSS---------------------SSSESSLSSRSSPRSLSTSVTAASTLQ--SKFNGHMSA 1141
            ...:.|                     |:||...:...:||...:...::.:.|  .:.|||...
  Fly   645 EPKAKSPVKIQVKTPVKTPLKSLVPYESASEEEEAPLPNPRKRPSGEDSSESDQESGQTNGHSKT 709

  Fly  1142 APALFNGNGNTSQLSSSLQLSRHVLHNHQ--------WHGSRSSVSAVENATQ-----------H 1187
                 ||:......|||:    ||.::.|        :...:.|..:.|:..:           |
  Fly   710 -----NGSHTNGSASSSV----HVNNSKQKTDAIDEIFKSLKKSADSDEDDDEEEPSIQLTNGWH 765

  Fly  1188 QQQQAAASLSLRHSFSTSSNYTETLSSLLRKSANTCSKDTLLFIDQQSHHHTAGLIEDDDDSYMG 1252
            .|:|     |...|.:..|..|....::::....         |.:.:.:.....||||.|..:.
  Fly   766 PQKQ-----SQSQSKAPPSPKTPPSPAVIKSKTG---------IWKVTRNDEVDAIEDDVDVVVV 816

  Fly  1253 RSLWISPV---TPHK 1264
            ..   |||   ||:|
  Fly   817 EG---SPVKIPTPNK 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592
Peptidase_C19 266..>461 CDD:271592
Peptidase_C19R <713..918 CDD:239139 38/205 (19%)
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 75/382 (20%)
UCH 172..477 CDD:278850 75/382 (20%)
Asp-B-Hydro_N <617..>731 CDD:191249 28/136 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456870
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.