DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp15-31 and Usp39

DIOPT Version :9

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:NP_573334.1 Gene:Usp39 / 32881 FlyBaseID:FBgn0030969 Length:494 Species:Drosophila melanogaster


Alignment Length:681 Identity:112/681 - (16%)
Similarity:182/681 - (26%) Gaps:353/681 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 PGVMGLKNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKADLKRRNKINSRKFGTKGE----LTEQ 322
            |||:||.|.....:.|.||..|||...|.:||:..|..|.:.|          ..|:    |.::
  Fly   156 PGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVVR----------PPGDSVFTLVQR 210

  Fly   323 LANVLKALWTCKNESDHST---SFKAVVDRYGTQFRSSTQHDAQEFLFWLLDKVHEDLNTASKRR 384
            ...:::.:|..:|...|.:   ..:|||.....:|:.:.|.|..:||.|.|:.:|        |.
  Fly   211 FGELMRKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLH--------RA 267

  Fly   385 YKSLKNSYGRSDEVIAAETLANHIRCNNSFVQAVFQAQFRSSLTCPRCEKQSNTFDPFHCISVQL 449
            .|..|:.                   |:|.:..:|..:.:                         
  Fly   268 LKGNKHP-------------------NSSILYKIFLGEMK------------------------- 288

  Fly   450 PQLTQQTIFVTVVYMTRLPRQVRMGLRVPAGSPIVALREQLQADTGIEGSRMVLVDLNAEGFTRV 514
                        :|..::|                                              
  Fly   289 ------------IYTRKMP---------------------------------------------- 295

  Fly   515 FYDTQPVETLSSIETIYCIEVPAATPVAKAATPSETGDKSAPTAVTPSPAAAQSQADLLLLVANV 579
                                            |.|..|            ||::|    ||....
  Fly   296 --------------------------------PVELDD------------AAKAQ----LLATEE 312

  Fly   580 YRAKDGADITRFGAPFSMKAPRDCSYQDLQKRMLREMAPLLKPEVFSYATPLAEMFRIRLQDPSA 644
            |  ||..:                     .|..:.....|..|.:|:      :.||        
  Fly   313 Y--KDQVE---------------------DKNFIYLTCDLPPPPLFT------DEFR-------- 340

  Fly   645 DPDTYLEQVE-HPLLTEMIDMALSVLSSEAGPQHIKLLLEWSSPEAHFISKQQDTEEAVVEHESV 708
              :..:.||. :.||::....|..               |:.:.:|:|:.:.:.|.         
  Fly   341 --ENIIPQVNLYQLLSKFNGTAEK---------------EYKTYKANFMKRFEITR--------- 379

  Fly   709 ARLSASKPSDTAALTLEQCLEHYTKAETLSAEDAWRCPHCQQYLPVVKTLGLWSLPDILVVHFKR 773
                                                                  ||..::::.||
  Fly   380 ------------------------------------------------------LPQFIILYIKR 390

  Fly   774 FRQHQ---SKGPQAAKLTTMVKFPLTAFDMSPHLARGVHESASSSLGMGTGIGLGLGLGSNPWKK 835
            |.::.   .|.|      |:|.||:.            |......|||                 
  Fly   391 FTKNTFFLEKNP------TIVNFPIK------------HVDFGDILGM----------------- 420

  Fly   836 ARSVDSRSSTLNSRCDAKDTRYDLYAVCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRVSKVPE 900
             |..|.         |.|||:|:|.|...|.||. :.|.|.|...:..:.|||:..|..|:::  
  Fly   421 -RQRDK---------DVKDTKYNLVANIVHDGDP-KKGTYRAHILHKANGQWYEMQDLHVTEI-- 472

  Fly   901 DDIEQDIINNEAYMLFYQRRSVDAGECSGSS 931
              :.|.|...|:|:..|:|       |..||
  Fly   473 --LPQMITLTESYIQIYER-------CPNSS 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592 34/127 (27%)
Peptidase_C19 266..>461 CDD:271592 37/201 (18%)
Peptidase_C19R <713..918 CDD:239139 39/207 (19%)
Usp39NP_573334.1 Peptidase_C19M 39..488 CDD:239134 107/666 (16%)
UCH 158..487 CDD:278850 105/663 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21646
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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