DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp15-31 and Usp30

DIOPT Version :9

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:NP_001284912.1 Gene:Usp30 / 31519 FlyBaseID:FBgn0029819 Length:558 Species:Drosophila melanogaster


Alignment Length:707 Identity:140/707 - (19%)
Similarity:221/707 - (31%) Gaps:246/707 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 VMGLKNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKADLKRRNKIN-SRKFGTKGELTEQLANVL 327
            :.||.|.|.|||:|.:||.::         ...|:.|.|:..|..: .||     .|...:.|.|
  Fly    38 IAGLHNFGLTCFLNTLLQAMA---------ACPQFIAWLQLYNNASPDRK-----SLITSMLNTL 88

  Fly   328 KALWTCKNESDHSTSFKAVVDRYGTQFRSSTQHDAQEFLFWLLDKVHEDLNTASKRRYKSLKNSY 392
            :.:     ...|:|       ..|..:.......|...|.|::.:...|.:..            
  Fly    89 EVV-----NGTHAT-------LRGDPYSPGAVLRALNALGWVIPQEEHDAHEL------------ 129

  Fly   393 GRSDEVIAAETLANHIRCNNSFVQAVFQAQFRSSLTCPRCEKQSNTFDPFHCISVQLPQLTQQTI 457
                                          |...|||  .|:::....|..|:|..||.......
  Fly   130 ------------------------------FHVLLTC--LEEEAIRPQPLGCLSDALPTDNDDNS 162

  Fly   458 FVTVVYMTRLPRQVRMGLRVPAGSPIVALREQLQADTGIEGSRMV-----------LVD-LNAEG 510
            .:.             |...|.|    ..|.......|:..|:.:           |.| ||.| 
  Fly   163 SLA-------------GTATPVG----GFRSFSSMAAGLGASQRIGDQPNRPSSAMLTDFLNME- 209

  Fly   511 FTRVFYDTQPVETLSSIETIYCIEVPAATPVAKAATPSETGDKSAPT----AVTPSPAAAQSQAD 571
                 ||..     :|::.:  :...|.||.:.|:.....|:....:    ||:|          
  Fly   210 -----YDES-----TSLQRL--VRSEAHTPDSPASVCERDGNDRLGSVLLDAVSP---------- 252

  Fly   572 LLLLVANVYRAKDGADITRFGAPFSMKAPRDCSYQDLQKRMLREMAPLL-KPEVFSYATPL---A 632
                                |.||..                    ||: .|:  |.|||:   .
  Fly   253 --------------------GTPFGF--------------------PLVSNPD--SLATPMLGGE 275

  Fly   633 EMFRIRLQDPSADPDTYLEQVEHPLLTEMIDMALSVLSSEAGPQHIKLLLEWS----SPEAHFIS 693
            ...|.||  |.:.     :|.:..|...:.....|:.....||..:.:   ||    |..||...
  Fly   276 RSSRPRL--PQSQ-----QQQDEGLNRRVSSSCRSLERLHRGPGRVSI---WSNMMPSQVAHPFQ 330

  Fly   694 KQQDTE--------EAVVEHESVARLSAS-KPSDTAALTLEQCLEHYTKAETLSAEDAWRCPHCQ 749
            .....:        ::.|.::....::.: .|.....|:|...|..|..:|.||  |. :|..|.
  Fly   331 GAMGAQIVCNGCGSKSAVRYDKFDSITLNLPPQRRTGLSLGHLLSEYITSEDLS--DV-KCDSCN 392

  Fly   750 QYLPVVKTLGLWSLPDILVVHFKRFRQHQSKGPQAAKLTTMVKFPLTAFDMSPHLARGVHESA-- 812
            :.....|::....||..|.:|..|.....:  .|..|....|.|| .:..|:|:.....|.::  
  Fly   393 ETTTHTKSVTFAKLPACLCIHVARTVWLPT--GQVCKRKDYVHFP-ESLSMAPYSFVQPHLNSQA 454

  Fly   813 -----------SSSLGMGTGIGLGLGLGSNPWKKARSVDSRSSTLNSRCDAKDTRYDLYAVCYHQ 866
                       ||||.|..|:|.|.|.|:...|..                    |.|.||..|.
  Fly   455 GTPWGSTMSLYSSSLPMNNGVGGGEGFGTMFPKNL--------------------YRLLAVVVHS 499

  Fly   867 GDTLETGHYT----AACKNPYDRQWYKFDDQRVSKVPEDDIEQDIINNEAYMLFYQR 919
            |:. .:||:.    .:.:|.:  :||...|..|.:|..|    ::::..||:|||.|
  Fly   500 GEA-NSGHFVTYRRGSLRNAH--RWYYTSDTIVREVSID----EVLSVPAYLLFYDR 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592 26/119 (22%)
Peptidase_C19 266..>461 CDD:271592 36/195 (18%)
Peptidase_C19R <713..918 CDD:239139 55/222 (25%)
Usp30NP_001284912.1 Peptidase_C19 39..>139 CDD:271592 30/169 (18%)
UCH <304..547 CDD:278850 62/278 (22%)
Peptidase_C19F <323..548 CDD:239127 59/257 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456896
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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