DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp15-31 and Usp20

DIOPT Version :10

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:NP_001101297.1 Gene:Usp20 / 311856 RGDID:1305621 Length:915 Species:Rattus norvegicus


Alignment Length:719 Identity:161/719 - (22%)
Similarity:256/719 - (35%) Gaps:228/719 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 GVMGLKNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKADLKRRNKINSRKFGTKGELTEQLANVL 327
            |:.|:||.||:|:|||.||.||:...|.::|:   ....|.|.:|        |..|.:....::
  Rat   143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFL---ECGGLVRTDK--------KPALCKSYQKLI 196

  Fly   328 KALWTCKNES-DHSTSFKAVVDRYGTQFRSSTQHDAQEFLFWLLDKVHEDLNTASKRRYKSLKNS 391
            ..:|..|..| ...||....:......||...|.|.||||..|:|::||:|              
  Rat   197 SEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEEL-------------- 247

  Fly   392 YGRSDEVIAAETLANHIRCNNSFVQAVFQAQFRSSLTCPRCEKQSNTFDPF-HCISVQ------- 448
               .:.::||.......|.::|           |.....|...:|.:.|.| .|.|..       
  Rat   248 ---KEPMVAAVAALTDARDSDS-----------SDTDERRDGDRSPSEDEFLSCDSSSDRGEGDG 298

  Fly   449 -----LPQLTQQTIFVTVVYMTRLPRQVRMGLRVPAGSPIVALREQLQADTGIEGSRMVLVDLNA 508
                 .....:..:.::......:..:.||..|..:........||:..|..::.:...|.:.:.
  Rat   299 QGRGGGSSKAEMELLISDEAGRAISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMASLDEQSR 363

  Fly   509 EGFTRVFYDTQPVETLSSIETIY-------CIEV-------------PAATPV--------AKAA 545
            |........|.|.:|......::       |..|             |.|:||        .||.
  Rat   364 EAQPPSPRPTSPCQTPEPDNEVHIRSSSRPCSPVHHHEGHTKLSSSPPRASPVRMGPSYVLKKAQ 428

  Fly   546 TPSETGDKSAPTAVTPSPAAAQSQADLLLLVANVYRAKDGADITRFGAPFSMKAPRDC------- 603
            .||..|.:             :.:.....::::|:.          |:..|:.....|       
  Rat   429 VPSTGGRR-------------RKEQSYRSVISDVFN----------GSVLSLVQCLTCDRVSTTV 470

  Fly   604 -SYQDLQKRMLREMAPLLKPEVFSYATPLAEMFRIRLQDPSADP----DTYLEQVEHPLLTEMID 663
             ::|||.       .|:...|      .||::.....|:..|.|    |:|..|           
  Rat   471 ETFQDLS-------LPIPGKE------DLAKLHSAIYQNVPAKPGACGDSYSSQ----------- 511

  Fly   664 MALSVLSSEAGPQHIKLLLEWSSPEAHFISKQQDTEEAVVEHESVARLSAS-KPS--DTAALTLE 725
                               .|.:              .:||:  :.|...| .||  ....:|||
  Rat   512 -------------------GWLA--------------FIVEY--IRRFVVSCTPSWFWGPVVTLE 541

  Fly   726 QCLEHYTKAETLSAEDAWRCPHCQQYLPVVKTLGLWSLPDILVVHFKRFRQHQSKGPQAAKLTTM 790
            .||..:..|:.|..::.:.|..|::....||...:..||:||.||.|||| |:..  .:.|:::.
  Rat   542 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFR-HEVM--YSFKVSSH 603

  Fly   791 VKFPLTAFDMSPHLARGVHESASSSLGMGTGIGLGLGLGSNPWKKARSVDSRSSTLNSRCDAKDT 855
            |.|||...|:.|.||:                                          .|.::.|
  Rat   604 VSFPLEGLDLRPFLAK------------------------------------------ECTSQVT 626

  Fly   856 RYDLYAVCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRVSKVPEDDIEQDIINNEAYMLFYQRR 920
            .|||.:|..|.| |..:|||.|.|:|..:.|||:||||.|::|.|..::    |.|||:|||::.
  Rat   627 TYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ----NVEAYVLFYRKS 686

  Fly   921 SVDA 924
            |.:|
  Rat   687 SEEA 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 UBP12 <255..921 CDD:227847 159/714 (22%)
Usp20NP_001101297.1 zf-UBP 30..90 CDD:460464
UCH 145..683 CDD:425685 156/708 (22%)
DUSP 703..786 CDD:197831
DUSP 811..895 CDD:197831
Blue background indicates that the domain is not in the aligned region.

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