DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp15-31 and Usp4

DIOPT Version :9

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:XP_006511759.1 Gene:Usp4 / 22258 MGIID:98905 Length:967 Species:Mus musculus


Alignment Length:968 Identity:264/968 - (27%)
Similarity:383/968 - (39%) Gaps:275/968 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ADTSTTNAAKKIRRTFSMPRNPFRWTRKFKTAVAVTSSAGAENDNESGKNNGARERRGSHTAISS 114
            |||..| ..|::|:.|::|..  |.||.:...::.|....::.||..   ..|...:|....|..
Mouse   159 ADTIAT-IEKEMRKLFNIPAE--RETRLWNKYMSNTYEQLSKLDNTI---QDAGLYQGQVLVIEP 217

  Fly   115 CVGGGRGRSGSIVSLSSYEAPFISSTNNNTTTAS-----------NGNNNNSSSSNINSKRTRAL 168
            ....|.....|:.|.|| .||..:.|.::..:||           ||::.|||.           
Mouse   218 QNEDGTWPRQSLQSKSS-TAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSSG----------- 270

  Fly   169 RRSSFRKFLNRIAQHLSSTVNVVSEEKHSPANRIAFIEIVPFYTGCWRRKEANKHGQPSVSGSSS 233
                                      .||                               ||.|.
Mouse   271 --------------------------MHS-------------------------------SGVSR 278

  Fly   234 GGGGGAGGPGGGERVPPIGGYQWPADQTPGVMGLKNHGNTCFMNAVLQCLSHTDILAEYFVLDQY 298
            ||.|.:......|  ||....|      ||:.||.|.|||||||:.|||||:|..|.|||:.|:|
Mouse   279 GGSGFSASYNCQE--PPSPHIQ------PGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEY 335

  Fly   299 KADLKRRNKINSRKFGTKGELTEQLANVLKALWTCKNESDHSTSFKAVVDRYGTQFRSSTQHDAQ 363
            :|::.|.|.:     |.|||:.|..|.::|.:|:.::.......||..|.|:..||....|.|:|
Mouse   336 EAEINRDNPL-----GMKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQ 395

  Fly   364 EFLFWLLDKVHEDLNTASKRRYKSLKNSYGRSDEVIAAETLANHIRCNNSFVQAVFQAQFRSSLT 428
            |.|.::||.:|||||...|:.|...|::.||.|.|:|.|...||...|:|.:...|...|:|:|.
Mouse   396 ELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLV 460

  Fly   429 CPRCEKQSNTFDPFHCISVQLPQLTQQTIFVTVVYMTRLPRQVRMGLRVPAGSPIVALREQLQAD 493
            ||.|.|.|.|||||..:::.||....:.:.|.:|......|.::..:.||....|..|.|.|...
Mouse   461 CPECAKVSVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKL 525

  Fly   494 TGIEGSRMVLVDLNAEGFTRVFYDTQPVETLSSIETIYCIEVPAATPVAKAATPSETGDKSAPTA 558
            :||....||:.|:....|.::|...:.:..::..:.|:..||         ...|..|.:.....
Mouse   526 SGIAAENMVVTDVYNHRFHKIFQMDEGLSHITPRDDIFVYEV---------CNTSMDGSECITLP 581

  Fly   559 V-----TPSPAAAQSQADLLLLVANVYRAKDGADITRFGAPFSMKAPR-----DCSYQDLQKRML 613
            |     ...|::|.|.|.|                  :|.|..:..|:     :..||.:..|:.
Mouse   582 VYFREKKSRPSSASSGAVL------------------YGQPLLVSVPKHKLTLESLYQAVCDRIS 628

  Fly   614 REMAPLLKPEVFSYATPLAEMFRIRLQDPSA----------DPDTYLEQVEH-----PLLTEM-- 661
            |.:...|..|..|  :||         :|.|          |.:   |:::|     ..|:|:  
Mouse   629 RYIKQPLPDEFLS--SPL---------EPGACNGSRSSYEGDEE---EEMDHQEEGKEQLSEVEG 679

  Fly   662 -------IDMALSVLSSEAGPQHIKLL--------------------------------LEWSSP 687
                   .|.:.|....:..|:|.:|.                                ::|.|.
Mouse   680 SGEDDQGDDHSESAQKVKGQPRHKRLFTFSLVNSCGTADINSLATDGKLLKLNSRSTLAIDWDSE 744

  Fly   688 EAHFISKQQDTE----EAVVEHESVARLSASKP--SDTAALTLEQCLEHYTKAETLSAEDAWRCP 746
            .......:|::|    :|..:|     ||.|:|  ...||:.|.:|:|.:|..|||...|.|.||
Mouse   745 TRSLYFDEQESECFSPQACEKH-----LSMSQPQKKKKAAVALRECIELFTTMETLGEHDPWYCP 804

  Fly   747 HCQQYLPVVKTLGLWSLPDILVVHFKRFRQHQSKGPQAAKLTTMVKFPLTAFDMSPHLARGVHES 811
            .|:::....|...|||||.|||||.|||..::.   ...||.|:|:||:.|.:||..:       
Mouse   805 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRY---WRDKLDTVVEFPVRALNMSEFV------- 859

  Fly   812 ASSSLGMGTGIGLGLGLGSNPWKKARSVDSRSSTLNSRCD--AKDTRYDLYAVCYHQGDTLETGH 874
                                                  ||  |:...|||.||..|.| .:..||
Mouse   860 --------------------------------------CDRSARPYVYDLIAVSNHYG-AMGVGH 885

  Fly   875 YTAACKNPYDRQWYKFDDQRVSKVPEDDIEQDIINNEAYMLFYQRRSVDAGECSGSSS 932
            |||..||..:.:||.|||..||...||    .|:...||:||||||.   .|||.:||
Mouse   886 YTAYAKNRLNGKWYYFDDSSVSLASED----QIVTKAAYVLFYQRRD---DECSSTSS 936

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592 53/120 (44%)
Peptidase_C19 266..>461 CDD:271592 81/194 (42%)
Peptidase_C19R <713..918 CDD:239139 70/208 (34%)
Usp4XP_006511759.1 UBP12 35..927 CDD:227847 257/954 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1283205at2759
OrthoFinder 1 1.000 - - FOG0000596
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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