DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp15-31 and Usp15

DIOPT Version :9

Sequence 1:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster
Sequence 2:XP_006241493.1 Gene:Usp15 / 171329 RGDID:628795 Length:981 Species:Rattus norvegicus


Alignment Length:927 Identity:247/927 - (26%)
Similarity:375/927 - (40%) Gaps:210/927 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 NGNNNNSSSSNINSKRTRALRRSSFRKFLNRIAQHLSSTVNVVSEEKHSPANR-IAFIEIVPFYT 212
            |||.||..:...:...|........||..|...:..:...|........|.|: .:.|:....|.
  Rat   141 NGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKEARLWNKYMSNTFEPLNKPDSTIQDAGLYQ 205

  Fly   213 GCWRRKEANKHGQPSVSGSSSGGGGGAGGPGGG--ERVPPIG----------------------- 252
            |     :.....|.:..|:...|......||..  ..:|.|.                       
  Rat   206 G-----QVLVIEQKNEDGTWPRGPSAPKSPGASNFSTLPKISPSSLSNNYNNINNRNVKNSNYCL 265

  Fly   253 ---------GYQWPA--DQTPGVMGLKNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKADLKRRN 306
                     .|..|.  ::.||:.||.|.|||||||:.:||||:|..|.|||:.|:|:.:|...|
  Rat   266 PSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDN 330

  Fly   307 KINSRKFGTKGELTEQLANVLKALWTCKNESDHSTSFKAVVDRYGTQFRSSTQHDAQEFLFWLLD 371
            .:     |.:||:.:..|.::|.:|:.|.......:||..|.|:..||....|.|.||.|.:|||
  Rat   331 PL-----GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLD 390

  Fly   372 KVHEDLNTASKRRYKSLKNSYGRSDEVIAAETLANHIRCNNSFVQAVFQAQFRSSLTCPRCEKQS 436
            .:|||||...|:.|..||::.||.|:|:|.|...||::.|:|.:..:|...|:|:|.||.|.|.|
  Rat   391 GLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 455

  Fly   437 NTFDPFHCISVQLPQLTQQTIFVTVVYMTRLPRQVRMGLRVPAGSPIVALREQLQADTGIEGSRM 501
            .|||||..:::.||...::::.|.:|.|..|.:.::..:.||....|:.|...|.|.:|:...:|
  Rat   456 VTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTALSALSGVPADKM 520

  Fly   502 VLVDLNAEGFTRVFYDTQPVETLSSIETIYCIEVPAATPVAKAATPSETGDKSAPTAVTPSPAAA 566
            ::.|:....|.|:|...:.:.::...:.||..|:..              :::..|.....|...
  Rat   521 IVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEINI--------------NRTEDTEHVVIPVCL 571

  Fly   567 QSQADLLLLVANVYRAKDGADITRFGAPFSMKAPRDCSYQDLQKRMLREMAPLLKPEVFSYAT-- 629
            :.:     ...:.|....|:.:  ||.||.|..||:.:...|...:|..|...:|....:..|  
  Rat   572 REK-----FRHSSYTHHTGSSL--FGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKMSTETEETDG 629

  Fly   630 PL----------------------AEMFRIRLQD--------PSADPDTYLE-------QVEHPL 657
            ||                      :||......|        ||.:.::..|       ..|:.|
  Rat   630 PLRCCEDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGL 694

  Fly   658 LTE-------------MIDMALSVLSS------EAGPQHIK-------------LLLEWSSPEAH 690
            .||             :.....:.|.:      :...:||:             |.|:| .|:..
  Rat   695 CTEETCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDW-DPDLK 758

  Fly   691 FISKQQDTEEAVVEHESVARLSASKPSDTAALTLEQCLEHYTKAETLSAEDAWRCPHCQQYLPVV 755
            .....::..|...:||||    ..||.....:.|:.|:|.:|..|.|.|||.|.||:|:::....
  Rat   759 KRYFDENAAEDFEKHESV----EYKPPKRPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQAT 819

  Fly   756 KTLGLWSLPDILVVHFKRFRQHQSKGPQAAKLTTMVKFPLTAFDMSPHLARGVHESASSSLGMGT 820
            |.|.|||||.:||||.|||...:.   ...||.|:|.||::..|||..|.               
  Rat   820 KKLDLWSLPPVLVVHLKRFSYSRY---MRDKLDTLVDFPISDLDMSEFLI--------------- 866

  Fly   821 GIGLGLGLGSNPWKKARSVDSRSSTLNSRCDAKDTRYDLYAVCYHQGDTLETGHYTAACKNPYDR 885
                      ||                  :|...||:|.||..|.|. :..|||||..||..|.
  Rat   867 ----------NP------------------NAGPCRYNLIAVSNHYGG-MGGGHYTAFAKNKDDG 902

  Fly   886 QWYKFDDQRVSKVPEDDIEQDIINNEAYMLFYQRRSVDAG--------ECSGSSSNSGDHWVSRI 942
            :||.|||..||...||    .|::..||:|||||:...:|        |..|:|:.:|       
  Rat   903 KWYYFDDSSVSTASED----QIVSKAAYVLFYQRQDTFSGTGFFPLDRETKGASAATG------- 956

  Fly   943 APASSSSASSTSGKERE 959
            .|..|...|:.:..:.|
  Rat   957 VPLESDEDSNDNDNDLE 973

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592 51/120 (43%)
Peptidase_C19 266..>461 CDD:271592 80/194 (41%)
Peptidase_C19R <713..918 CDD:239139 71/204 (35%)
Usp15XP_006241493.1 UBP12 12..932 CDD:227847 236/877 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1283205at2759
OrthoFinder 1 1.000 - - FOG0000596
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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