DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mid1 and yam8

DIOPT Version :10

Sequence 1:NP_001033972.1 Gene:Mid1 / 37953 FlyBaseID:FBgn0053988 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_592865.1 Gene:yam8 / 2541627 PomBaseID:SPAC1F5.08C Length:486 Species:Schizosaccharomyces pombe


Alignment Length:206 Identity:45/206 - (21%)
Similarity:71/206 - (34%) Gaps:52/206 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   495 SHSPLASERPPSTTDDQDVDVSSTTEEAEP-----------EPTLSYSHLHAQEPVLAHQQDPRE 548
            |.|..|.:..|||.:..:.|.|.|.....|           :|.::|: .:..||.:.       
pombe   212 SSSFCAFQNNPSTVNTNNADRSMTLRGLGPFAKEQFYLKGLDPNVTYT-AYLVEPNIG------- 268

  Fly   549 REQEQQEQQQCLEYLGDSAESSPQHLCGLQSPGHLLERLKVLRLRNCCERSVF----SSLHTLAL 609
                   |.....|.|.:..:.....|.|           :..|:.|.|.:..    |||.:.:.
pombe   269 -------QPGGTVYPGVTFTTKTSPACQL-----------IYDLQFCSEVAYAVPGNSSLFSASA 315

  Fly   610 NASLTDRQECVRVLSDLLDVDGLANRITCELAEILFRFDCRQVYSLINQCDDCKEAYRRWVCSTL 674
            .|...|:|           ..|.....|..|..|.........|||:..|.||..:|:.|:|:::
pombe   316 LAEWYDQQ-----------AYGYYQNFTYTLDLIPCNATSWSAYSLLKNCSDCANSYKNWLCASV 369

  Fly   675 VPYFAEPKDVS 685
            :|..|:..|.|
pombe   370 IPRCADINDNS 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mid1NP_001033972.1 Mid1 <651..>676 CDD:432882 9/24 (38%)
yam8NP_592865.1 Mid1 60..456 CDD:432882 45/206 (22%)

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