DRSC/TRiP Functional Genomics Resources

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Protein Alignment SiaT and St3gal5

DIOPT Version :10

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001385641.1 Gene:St3gal5 / 83505 RGDID:620875 Length:414 Species:Rattus norvegicus


Alignment Length:332 Identity:78/332 - (23%)
Similarity:121/332 - (36%) Gaps:92/332 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 HNKTQQFRQRIVR-AFEKAMVESVNESQANHYNVDYKPVFGDSFEEQYYPSTCLVMEAGVRVLRR 212
            |..||:..|:..| ...|..::.:.:.:   |::|.:|..      |..|:   ..||.::.   
  Rat   108 HRNTQEVFQKECRPGHAKKTMDLLFKGK---YSMDLEPFV------QKIPT---ASEAELKY--- 157

  Fly   213 KDAPFNKLPFGRL------------FPRQKLFRNVKDIKTCAIVSSAGSLAGSKLGRFIDTHDIV 265
             |.||....|...            ||..   ...|..|.|.::.:.|.|.|.:||..::..|:|
  Rat   158 -DPPFGFRKFSSKVQSLLDMLPEHDFPEH---LRAKHCKRCVVIGNGGILHGLELGHALNQFDVV 218

  Fly   266 MRFNHAPTQGHEVDVGSKTTIRVVNSQVVTKPE-----------FDFTRAPIFRNVTIAAWDPGK 319
            :|.|.||.:|:...||:|||||      :|.||           .|...|.:|::|.........
  Rat   219 IRLNSAPIEGYSEHVGNKTTIR------MTYPEGAPLSDAEYYANDLFVAVLFKSVDFKWLQAMV 277

  Fly   320 YNGTLEDWLTSADYDLF-------------SNYELYRRRYPKSRAFLI----DPHSVWRLWQSLQ 367
            .|.:|..|:.     ||             .::.:......|..||.|    :|.|  |.|    
  Rat   278 KNESLPFWIR-----LFFWKQVAEKIPLQPKHFRILNPVIIKETAFDILQYSEPQS--RFW---- 331

  Fly   368 MFAGNRPISKNPPSSGFIGLALLLPHCPQVDFVEY-----VPSTRLNGRCHYYSKEMNSACTFGS 427
               |:   .||.|:.|.|.:.|....|.:|....:     .|.|.|    ||:..:...|..:..
  Rat   332 ---GH---DKNIPTIGIIAIVLATHLCDEVSLAGFGYDLSQPRTPL----HYFDSQCMGAMNWQV 386

  Fly   428 WHPLAAE 434
            .|.:..|
  Rat   387 MHNVTTE 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 GT29_ST6GAL1_2 199..469 CDD:467696 67/281 (24%)
St3gal5NP_001385641.1 GT29_ST3GAL5 190..400 CDD:467711 58/231 (25%)

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