DRSC/TRiP Functional Genomics Resources

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Protein Alignment SiaT and st6gal2b

DIOPT Version :9

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001164692.1 Gene:st6gal2b / 797439 ZFINID:ZDB-GENE-120426-2 Length:453 Species:Danio rerio


Alignment Length:497 Identity:150/497 - (30%)
Similarity:235/497 - (47%) Gaps:88/497 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QVTRASSGQSQALLSCLIIAVCAALIIQSGHIQGVKAQPGREPGEVNS--RQPGNGAYENSTGTE 65
            :|..|....:|.||..|::.:..||::   .......|..:.|..|:|  .:.....|...:|  
Zfish    10 RVQHAMKQSAQVLLLALLVWMLLALLV---FTYFADFQLNQNPKTVSSFNSESSRSTYSQHSG-- 69

  Fly    66 RRLRKVIWKCIPTGNGTTGHRVPRSVFHVRWNPNEKFIVESRENPAINSSK-LAPHPR------- 122
                                |..:|..:.||.     :...|..|...... |.||.:       
Zfish    70 --------------------RAIKSSSNARWG-----VFAERRGPYQRRQVFLPPHAKEYFYFRK 109

  Fly   123 -----LKVSKNTKLTLSPKLYLCHDKHSELCHNKTQQFR--------QRIVRA-FEKAMVESVNE 173
                 |.|.|:.  .:.|:    .:...:...|.....|        .|::.| .::||.:.|: 
Zfish   110 FDRRGLGVKKSK--IIPPE----DNDRDDYFSNPWSVVRGLWKGHVSSRMLSAKLQRAMKDHVH- 167

  Fly   174 SQANHYNVDYKPVFGD-SFEEQYYPSTCLVME-AGVRVLRRKDAPFNKLPFGRLF--PRQKLFRN 234
              .|.:.|.||   |. ...:......|.:.| |.:|.|...:.||..|.|.:|.  |.|:.:| 
Zfish   168 --TNKHRVLYK---GQRKLNKSKQELLCQMKEQAQIRTLNGTEQPFADLGFKQLVSPPLQQKYR- 226

  Fly   235 VKDIKTCAIVSSAGSLAGSKLGRFIDTHDIVMRFNHAPTQGHEVDVGSKTTIRVVNSQVVTKPEF 299
                 |||:|:|||::..|.||..||:||.|:|||.||::|:|.|||||||||::|||::..|::
Zfish   227 -----TCAVVASAGAILNSSLGHEIDSHDAVLRFNAAPSEGYERDVGSKTTIRIMNSQILANPKY 286

  Fly   300 DFTRAPIFRNVTIAAWDPGKYNGTLEDWLTSADYDLFSNYELYRRRYPKSRAFLIDPHSVWRLWQ 364
            .|..:.:::|:|:.||||..||..|..|....|||||:.|..:|:.:|:...:::.|..:|:||.
Zfish   287 RFGSSLLYKNITLVAWDPAPYNIDLHKWFLHPDYDLFTPYITHRKAFPEQPFYILHPSFIWKLWD 351

  Fly   365 SLQMFAGNRPISKNPPSSGFIGLALLLPHCPQVDFVEYVPSTRLNGRCHYYSKEMNSACTFGSWH 429
            .:|... ...|..|||||||||:.|::..|.::...||:||.|....|||:..:.:.|||||::|
Zfish   352 IVQSIT-EENIQPNPPSSGFIGIILMMNLCEKIHVYEYIPSMRQTDLCHYHELQYDMACTFGAYH 415

  Fly   430 PLAAEKLMALDMNMAEDDDMSVFQFGILRIRRPDKL-LCGFN 470
            ||..|||:...|:.|.::|          :|:..|: |.||:
Zfish   416 PLLYEKLLVKRMSTASEED----------LRKKGKVTLPGFS 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 Glyco_transf_29 224..437 CDD:279159 93/214 (43%)
st6gal2bNP_001164692.1 Glyco_transf_29 217..443 CDD:279159 98/242 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 208 1.000 Domainoid score I2806
eggNOG 1 0.900 - - E1_KOG2692
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 225 1.000 Inparanoid score I3478
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D231534at33208
OrthoFinder 1 1.000 - - FOG0002913
OrthoInspector 1 1.000 - - otm24805
orthoMCL 1 0.900 - - OOG6_109878
Panther 1 1.100 - - O PTHR46059
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5281
SonicParanoid 1 1.000 - - X1922
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.900

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