DRSC/TRiP Functional Genomics Resources

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Protein Alignment SiaT and St3gal2

DIOPT Version :10

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_113883.2 Gene:St3gal2 / 64442 RGDID:68413 Length:350 Species:Rattus norvegicus


Alignment Length:204 Identity:54/204 - (26%)
Similarity:86/204 - (42%) Gaps:56/204 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 FRNVKDIKTCAIVSSAGSLAGSKLGRFIDTHDIVMRFNHAPTQGHEVDVGSKTTIRVV--NSQVV 294
            ||:.:..:.||:|.::|:|.||..|:.:|:|:.:||.|.|||.|.|.||||:||...:  .|...
  Rat   143 FRDPQQCRRCAVVGNSGNLRGSGYGQEVDSHNFIMRMNQAPTVGFEKDVGSRTTHHFMYPESAKN 207

  Fly   295 TKPEFDFTRAPIFRNVTIAAWDPGKYNGTLEDWLTSADYDLFSNYELYRRRYPKSRAFL-IDPHS 358
            ......|...| |:.:.:.             |:.||    .|..:: |..|...::|| :|...
  Rat   208 LPANVSFVLVP-FKALDLM-------------WIASA----LSTGQI-RFTYAPVKSFLRVDKEK 253

  Fly   359 VWRLWQSLQMFAGNRPISKNP-----------------PSSGFIGLALLLPHCPQVDFVEYVPST 406
            |       |::        ||                 ||:|.:.|...|..|.:|:...:...:
  Rat   254 V-------QIY--------NPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVNVYGFGADS 303

  Fly   407 RLNGRCHYY 415
            |  |..|:|
  Rat   304 R--GNWHHY 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 GT29_ST6GAL1_2 199..469 CDD:467696 54/204 (26%)
St3gal2NP_113883.2 GT29_ST3GAL2 70..348 CDD:467707 54/204 (26%)

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