DRSC/TRiP Functional Genomics Resources

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Protein Alignment SiaT and st8sia3

DIOPT Version :10

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001106903.1 Gene:st8sia3 / 553510 ZFINID:ZDB-GENE-060228-4 Length:374 Species:Danio rerio


Alignment Length:407 Identity:96/407 - (23%)
Similarity:142/407 - (34%) Gaps:118/407 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 PRS-VFHVRWNPN--EKFIVESRENPAINSSKLAPHPRLKVSKNTKLTLSPKLYLCHD--KHSEL 147
            ||. :||..:...  .||:     :||..|...|.:..|:.|.|.:...|....|..:  :|.::
Zfish    45 PRMYMFHAGFRSQLAMKFL-----DPAFTSLNTALNENLQESSNWRFNRSAYAELSKEIAQHIDV 104

  Fly   148 CHNKTQQFRQRIVRAFEKAMVESVNESQANHYNVDYKPVFGDSFEEQYYPSTCLVMEAGVRVLRR 212
            .||.|             ....||...|..||:               |.|...|...|.. || 
Zfish   105 PHNFT-------------LTKNSVRVGQLMHYD---------------YSSHKYVFSIGEN-LR- 139

  Fly   213 KDAPFNKLPFGRLFPRQKLFRNVKDIKTCAIVSSAGSLAGSKLGRFIDTHDIVMRFNHAPTQGHE 277
                       .|.|......| |...|||:|.::|.|.||:.|..||.:|.|.|.|.|||:...
Zfish   140 -----------SLLPDASPVLN-KRYNTCAVVGNSGILTGSRCGPEIDKYDFVFRCNFAPTEVFR 192

  Fly   278 VDVGSKTTIRVVNSQVVTKPEFDFTRAPIFRNVTIAAWDPGKYNGTLED------WL------TS 330
            .|||.:|.:...|..::.|          :.|..:...|...:..:|:.      |:      ||
Zfish   193 RDVGRRTNLTTFNPSILEK----------YYNNLLTIQDRNNFFLSLKKLDGAILWIPAFFFHTS 247

  Fly   331 AD-----YDLFSNYELYRRRYPKSRAFLIDPHSVW----RLWQSLQMFAGNRPISKNPPSSGFIG 386
            |.     .|.|..::      .:.:..|..|.::.    |.|::.|       :|....|:|.:.
Zfish   248 ATVTRTLVDFFVEHK------GQLKVQLAWPGNIMQYVNRYWKTKQ-------LSPKRLSTGILM 299

  Fly   387 LALLLPHCPQVDFVEY-----VPSTRLNGRCHYYSKEMNSACTFGSW---HPLAAE-KLMALDMN 442
            ..|....|.||....:     .|:|......|||.|:.....|  .|   |.|..| ||:   ..
Zfish   300 FTLASSLCEQVHLYGFWPFGWDPNTGKELPYHYYDKKGTKFTT--KWQESHQLPTEFKLL---FK 359

  Fly   443 MAEDDDMSVFQFGILRI 459
            |..|        |:|::
Zfish   360 MHAD--------GVLKL 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 GT29_ST6GAL1_2 199..469 CDD:467696 70/291 (24%)
st8sia3NP_001106903.1 GT29_ST8SIA3_oligo 86..370 CDD:467698 83/361 (23%)

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