DRSC/TRiP Functional Genomics Resources

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Protein Alignment SiaT and st3gal1

DIOPT Version :9

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_021323934.1 Gene:st3gal1 / 553279 ZFINID:ZDB-GENE-060321-1 Length:369 Species:Danio rerio


Alignment Length:230 Identity:65/230 - (28%)
Similarity:103/230 - (44%) Gaps:38/230 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 LFPRQK--LFRNVKDIKTCAIVSSAGSLAGSKLGRFIDTHDIVMRFNHAPTQGHEVDVGSKTTIR 287
            |||.::  :..:....:.||:|.::|::.||..|:.||:||.|:|.|..||:|:|.|||||||.|
Zfish   156 LFPDEEHYVVTDPNRCRICAVVGNSGNILGSHYGQLIDSHDFVIRINKGPTKGYETDVGSKTTHR 220

  Fly   288 VVNSQVVTKPEFDFTRAPIFRNVTIAAWDPGKYNGTLEDWLTSADYDLFSNYEL---YRRRYP-- 347
            ::      .||    .|....|.|.....|.|....  .||.|    :|:...:   |.:..|  
Zfish   221 IM------YPE----SAMDLDNSTHLVLLPFKVKDM--QWLIS----VFTTKHITSTYLKVRPTI 269

  Fly   348 ---KSRAFLIDPHSVWRLWQSLQMFAGNRPISKNPPSSGFIGLALLLPHCPQVDFVEYVPSTRLN 409
               :.:..:|.|..:..:::|.....|:.      ||:|||.|...|..|.||....:  ..:|:
Zfish   270 NADREKVMIIHPAFIKYVYESWLRKHGSY------PSTGFITLIFALHICDQVSVFGF--GAKLD 326

  Fly   410 GRCHYYSKE----MNSACTFGSWHPLAAEKLMALD 440
            |..|:|..|    .|.....|.:......||:.::
Zfish   327 GNWHHYFDESLAHFNRGRHGGDYENRTIHKLLLMN 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 Glyco_transf_29 224..437 CDD:279159 64/225 (28%)
st3gal1XP_021323934.1 Glyco_transf_29 118..367 CDD:307084 65/230 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2692
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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