DRSC/TRiP Functional Genomics Resources

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Protein Alignment SiaT and st3gal4

DIOPT Version :9

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001076498.1 Gene:st3gal4 / 504044 ZFINID:ZDB-GENE-050309-174 Length:335 Species:Danio rerio


Alignment Length:375 Identity:86/375 - (22%)
Similarity:134/375 - (35%) Gaps:125/375 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LKVSKNTKLTLSPKL-----YLCHDKHSE------------LCHNKTQQFRQRIVRAFEKAMVES 170
            ||.:|...|.|.|.:     |.|...:.|            ||.|      .|:.:.:|..    
Zfish     3 LKATKTWFLRLLPVVLFFICYYCSQFYFESSGGKSPHPTLALCPN------YRLQKKWENL---- 57

  Fly   171 VNESQANHYNVDYKPVFGDSFEEQYYPSTCLVMEAGVRVLRRKDAPFNKLPFGRLFPRQKLFR-- 233
                   :.|:..||......|:.::... |..||              ||:|.......|.:  
Zfish    58 -------NLNMSRKPELFLKLEDFFWKDH-LSAEA--------------LPYGIKGSELLLLKVL 100

  Fly   234 ----------NVK--DIKTCAIVSSAGSLAGSKLGRFIDTHDIVMRFNHAPTQGHEVDVGSKTTI 286
                      |::  |.:|||::.:..:|..|.||..|:.:|:|:|.|.||.:|.|.|||:|||:
Zfish   101 AAISSFTMPANIESLDCRTCAVIGNGFALKNSSLGEIINKYDVVIRLNDAPVRGFEEDVGNKTTL 165

  Fly   287 RVVNSQVVTKPEFDFTRAPIFRNVTIAAWDPGKYN--GTL--------ED--WLTSADYDLFSNY 339
            |:.      .||             .|:::||.:|  .||        :|  ||....||     
Zfish   166 RLF------YPE-------------SASYNPGIHNDPDTLLVLVPFKQQDLRWLKEILYD----- 206

  Fly   340 ELYRRRYPKSRAFLIDPHSVW-------RLWQSLQMFAGNRPISKNP-----------PSSGFIG 386
               .:|..|  .|...|..:|       |:.....:....|...:.|           |::|.:.
Zfish   207 ---EKRVQK--GFWKPPPQIWLGRASQIRVLDPYFLRITARKFLQIPVQPRKQQKAVHPTTGLLA 266

  Fly   387 LALLLPHCPQVDFV--EYVPSTRLNGRCHYYSKEMNSACTFGSWHPLAAE 434
            :.:.|.:|..|...  .|..|...|...|||.::...:.. .|:|.|..|
Zfish   267 VFVALNYCDVVHVAGFGYPASRNQNQPIHYYGQQTMKSMK-NSYHDLNQE 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 Glyco_transf_29 224..437 CDD:279159 62/257 (24%)
st3gal4NP_001076498.1 Glyco_transf_29 74..328 CDD:279159 68/287 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2692
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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