DRSC/TRiP Functional Genomics Resources

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Protein Alignment SiaT and St6galnac5

DIOPT Version :10

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001258290.1 Gene:St6galnac5 / 365984 RGDID:1564252 Length:339 Species:Rattus norvegicus


Alignment Length:269 Identity:70/269 - (26%)
Similarity:112/269 - (41%) Gaps:48/269 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 PFNKLPFGRLFPRQ-KLFRNVKD-------IKTCAIVSSAGSLAGSKLGRFIDTHDIVMRFNHAP 272
            |....|.|   ||| ..:..|.|       .|.||:|:|:|.|..|:.|..||..:.|:|.|.||
  Rat    69 PHRTAPVG---PRQLDGYLGVADHKPLKMHCKDCALVTSSGHLLRSQQGPHIDQTECVIRMNDAP 130

  Fly   273 TQGHEVDVGSKTTIRVV---NSQVVTKPEFDFTRAPIFRNVTIAAWDPGKYNGTLEDWLTSADYD 334
            |:|:.:|||::|::||:   :.|.:.:...|...  :.:......|.|..|      ........
  Rat   131 TRGYGLDVGNRTSLRVIAHSSIQRILRNRHDLLN--VSQGTVFIFWGPSSY------MRRDGKGQ 187

  Fly   335 LFSNYELYRRRYPKSRAFLIDPHSVWRLWQSLQMFAG-NRPISKNPPSSGFIGLALLLPHCPQVD 398
            :::|.:|..:..|:.:||:|..|.:.:..:..:...| :|.||....|:|:..:.:.|..|.::|
  Rat   188 VYNNLQLLSQVLPRLKAFMITRHKMLQFDELFKQETGKDRKISNTWLSTGWFTMTIALELCDRID 252

  Fly   399 FVEYVPSTRLNGRC----------HYYSKEMNSACTF---------GSWHPLAAEKLMALDMNMA 444
            ....||.    ..|          |||.......||.         ||.|....||  .:..|.|
  Rat   253 VYGMVPP----DFCRDPKHPSVPYHYYEPSGPDECTMYLSHERGRKGSHHRFITEK--RVFKNWA 311

  Fly   445 EDDDMSVFQ 453
            ...::..||
  Rat   312 RTFNIHFFQ 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 GT29_ST6GAL1_2 199..469 CDD:467696 70/269 (26%)
St6galnac5NP_001258290.1 GT29_ST6GALNAC5 82..325 CDD:467704 64/253 (25%)

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