DRSC/TRiP Functional Genomics Resources

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Protein Alignment SiaT and St3gal1

DIOPT Version :10

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001013237.2 Gene:St3gal1 / 362924 RGDID:1309373 Length:340 Species:Rattus norvegicus


Alignment Length:256 Identity:57/256 - (22%)
Similarity:88/256 - (34%) Gaps:89/256 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 LRRKDAPFN---------KLPFGRLFPRQKLFRNVKDIKTCAIVSSAGSLAGSKLGRFIDTHDIV 265
            |:|:..|.|         :|..|.:.|  .|.:.:...:.||:|.::|:|..|..|..||:||.|
  Rat   104 LQRERKPNNLSDTVKELFRLVPGNVDP--MLNKRLVGCRRCAVVGNSGNLKDSSYGPEIDSHDFV 166

  Fly   266 MRFNHAPTQGHEVDVGSKTTIRVV----------NSQVVTKP----------------EFDFTRA 304
            :|.|.|||.|.|.||||:||..:|          |..:|..|                ....|..
  Rat   167 LRMNRAPTVGFEADVGSRTTHHLVYPESFRELGENVNMVLVPFKITDLQWVISATTTGTITHTYV 231

  Fly   305 PI-----FRNVTIAAWDPGKYNGTLEDWLTSADYDLFSNYELYRRRYPKSRAFLIDPHSVWRLWQ 364
            |:     .:...|..:.|.......::||..            ..||                  
  Rat   232 PVPPKIKVKQEKILIYHPAFIKYVFDNWLQG------------HGRY------------------ 266

  Fly   365 SLQMFAGNRPISKNPPSSGFIGLALLLPHCPQVDFVEYVPSTRLNGRCHYYSKEMNSACTF 425
                           ||:|.:.:...:..|.:||...:...::  |..|:|.:...||..|
  Rat   267 ---------------PSTGILSVIFSIHICDEVDLYGFGADSK--GNWHHYWENNPSAGAF 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 GT29_ST6GAL1_2 199..469 CDD:467696 57/256 (22%)
St3gal1NP_001013237.2 GT29 59..338 CDD:480271 57/256 (22%)

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