DRSC/TRiP Functional Genomics Resources

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Protein Alignment SiaT and St6gal2

DIOPT Version :9

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001094358.1 Gene:St6gal2 / 301155 RGDID:1559663 Length:525 Species:Rattus norvegicus


Alignment Length:447 Identity:132/447 - (29%)
Similarity:198/447 - (44%) Gaps:121/447 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HIQGVKAQPGREPGEVNSRQPGNG------------------AYEN---STGTERRLRKVIWKCI 76
            |.||....|  .||| :|.|.|.|                  ||::   ||...|.....:||  
  Rat   144 HRQGALGLP--SPGE-SSWQSGPGQPKQEKLRHPRRGSLPEEAYDSDMLSTSMSRAFLYRLWK-- 203

  Fly    77 PTGNGTTGHRVPRSVFHVRWNPNEKFIVESRENPAINSSKLAPHPRLKVSKNTKLTLSPKLYLCH 141
                ||.                              |||:.         |.:|..:.:.|:..
  Rat   204 ----GTV------------------------------SSKML---------NPRLQKAMRYYMSF 225

  Fly   142 DKHSELCHNKTQQFRQRIVRAFEKAMVESVNESQANHYNVDYKPVFGDSFEEQYYPSTCLVMEAG 206
            :||.       .:|.:|..|...:...|.:.|.:                           ....
  Rat   226 NKHG-------VRFSRRGRREARRTGPELLCEMR---------------------------KRVR 256

  Fly   207 VRVLRRKDAPFNKL---------PFGRLFPRQKLFRNVKDIKTCAIVSSAGSLAGSKLGRFIDTH 262
            ||.|..|:|||:.|         |..:|.||        .:::||:|.|||::..|.||..||:|
  Rat   257 VRTLDGKEAPFSGLGWRPLVPGVPLSQLHPR--------GLRSCAVVMSAGAILNSSLGEEIDSH 313

  Fly   263 DIVMRFNHAPTQGHEVDVGSKTTIRVVNSQVVTKPEFDFTRAPIFRNVTIAAWDPGKYNGTLEDW 327
            |.|:|||.|||:|:|.|||:|||:|::|||::..|...|..:.::::|.:.||||..|:..|..|
  Rat   314 DAVLRFNSAPTRGYEKDVGNKTTVRIINSQILANPSHHFIDSSLYKDVILVAWDPAPYSANLNLW 378

  Fly   328 LTSADYDLFSNYELYRRRYPKSRAFLIDPHSVWRLWQSLQMFAGNRPISKNPPSSGFIGLALLLP 392
            ....||:||:.|..:|.:||....:::.|..:|:||..:|.....: |..|||||||||:.:::.
  Rat   379 YKKPDYNLFTPYIQHRLKYPTQPFYILHPKFIWQLWDIIQENTREK-IQPNPPSSGFIGILVMMS 442

  Fly   393 HCPQVDFVEYVPSTRLNGRCHYYSKEMNSACTFGSWHPLAAEKLMALDMNMAEDDDM 449
            .|.:|...||:||.|....|||:....::|||.|::|||..|||:...:|.....|:
  Rat   443 MCQEVHVYEYIPSVRQTELCHYHELYYDAACTLGAYHPLLYEKLLVQRLNTGTQADL 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 Glyco_transf_29 224..437 CDD:279159 87/212 (41%)
St6gal2NP_001094358.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..107
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..183 10/40 (25%)
Glyco_transf_29 277..507 CDD:395627 91/232 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 198 1.000 Domainoid score I2990
eggNOG 1 0.900 - - E1_KOG2692
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 202 1.000 Inparanoid score I3684
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D231534at33208
OrthoFinder 1 1.000 - - FOG0002913
OrthoInspector 1 1.000 - - otm45008
orthoMCL 1 0.900 - - OOG6_109878
Panther 1 1.100 - - O PTHR46059
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1922
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.870

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