DRSC/TRiP Functional Genomics Resources

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Protein Alignment SiaT and St6galnac1

DIOPT Version :10

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001099329.1 Gene:St6galnac1 / 287920 RGDID:1562048 Length:520 Species:Rattus norvegicus


Alignment Length:563 Identity:114/563 - (20%)
Similarity:190/563 - (33%) Gaps:204/563 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SSGQSQALLSCLIIAVCAALIIQ---------------SGHIQGVKAQPGREPGEVNSRQPGNGA 57
            |.||:..||:.|::......:::               ...:|||..:|..: |.:.:..|   .
  Rat     9 SQGQTFLLLTGLMLLFILPSVVKEPSTRVSRYQFIEDNESSLQGVPQKPAPQ-GPIVTLTP---T 69

  Fly    58 YENSTGTERRLRKVIWKCI-----PTGNGTTGHRVPRSVFHVRWNPNEKFIVESRENPAINSSKL 117
            ..|...|..|.:   |..:     .|..|..|..|.:.:..:|..|         |||     |.
  Rat    70 VHNKKTTSVRTK---WVELQKQDRATARGERGEGVEKKLQAIRLAP---------ENP-----KG 117

  Fly   118 APHPRLKVSKNTKLTLSPKLYLCHDKHSELCHNKTQQ------FRQRIVR------AFEKAMVES 170
            ...|.:|...:..|...|:      ....|...|||.      .::::|:      :|.....:.
  Rat   118 KAEPEVKTPASKHLDKLPR------ATGALSTRKTQMATGAAPAKKKVVQPTPTPASFPHLTTQR 176

  Fly   171 VNESQANHYNVDYKPVFGDSFEEQY-----------------------------YPSTCLVMEAG 206
            ....:|:    |:|......|||:|                             .|:..|.:::|
  Rat   177 RQRLKAS----DFKSEPRWDFEEEYSLDGGSLQTTCPGSVKITASHSPWLQNIFLPNITLFLDSG 237

  Fly   207 VRVLRRKDAPFNKL-----PFGRL----------------FPRQKLF------RNVKDIKTCAIV 244
                |...:.:.:|     |||.:                .|:|:|.      ||:..| |||:|
  Rat   238 ----RFNQSEWYRLEHFTPPFGFMELNQSLVQKVVSRFPPVPQQQLLLASLPTRNLTCI-TCAVV 297

  Fly   245 SSAGSLAGSKLGRFIDTHDIVMRFNHAPTQGHEVDVGSKTT------IRVVNSQVVTKPEFDFTR 303
            .:.|.|..|::|:.||:||.|.|.:.|..:|:|.|||::|:      ..:|.| ::......|..
  Rat   298 GNGGILNNSRMGQEIDSHDYVFRLSGAVIKGYEQDVGTRTSFYGFTAFSLVQS-ILNLGRQGFQH 361

  Fly   304 APIFRNVTIAAWDPGKYNGTLE-----DWL-------TSADYDLF----SNYELYRRRYPKSRAF 352
            .|:.::|        :|...||     :||       |.|:..|:    ...|.:|......|.|
  Rat   362 VPLGKDV--------RYLHFLEGTRDYEWLEAMFLNRTMANTKLYWFRHRPQEAFREALDLDRYF 418

  Fly   353 LIDPHSV-----------------WRLWQSLQMFAGNRPISKNPPSSGFIGLALLLPHCPQVDFV 400
            |:.|..:                 |||::               |::|.:.|...|..|.:|...
  Rat   419 LVHPDFLRYMKNRFLRSKTLDTAHWRLYR---------------PTTGALLLLTALHLCDKVSAY 468

  Fly   401 EYVPSTRLNGRCHYYSKEMNSACTFGSW--------HPLAAEK 435
            .::.........|||..         ||        |..|.|:
  Rat   469 GFITQGHERFSDHYYDT---------SWKRLIFYINHDFALER 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 GT29_ST6GAL1_2 199..469 CDD:467696 70/311 (23%)
St6galnac1NP_001099329.1 GT29 208..519 CDD:480271 71/333 (21%)

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