DRSC/TRiP Functional Genomics Resources

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Protein Alignment SiaT and St6gal1

DIOPT Version :9

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001106815.1 Gene:St6gal1 / 25197 RGDID:3676 Length:403 Species:Rattus norvegicus


Alignment Length:372 Identity:123/372 - (33%)
Similarity:185/372 - (49%) Gaps:29/372 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 RVPRSVFHVRWNPNEKFIVESRENPAINSSKLAPHPRLKVSKNTKLTLSPK---LYLCHDKHSEL 147
            ::|:|        .||..:.|......::||..|...:.:....::|...|   .:...||.|..
  Rat    43 QMPKS--------QEKVAMGSASQVVFSNSKQDPKEDIPILSYHRVTAKVKPQPSFQVWDKDSTY 99

  Fly   148 CHNKTQQFRQRIVRAFEKAMVESVNESQANHYNVDYK-PVFGDSFEEQYYPSTCLVME-AGVRVL 210
                 .:...|:::.:.       |....|.|.|.|| |..|..|..:  ...|.:.: ..|.::
  Rat   100 -----SKLNPRLLKIWR-------NYLNMNKYKVSYKGPGPGVKFSVE--ALRCHLRDHVNVSMI 150

  Fly   211 RRKDAPFNKLPFGRLFPRQKLFRNVKDIKTCAIVSSAGSLAGSKLGRFIDTHDIVMRFNHAPTQG 275
            ...|.|||...:....|::.....|...:.||:|||||||..|:|||.||.||.|:|||.|||..
  Rat   151 EATDFPFNTTEWEGYLPKENFRTKVGPWQRCAVVSSAGSLKNSQLGREIDNHDAVLRFNGAPTDN 215

  Fly   276 HEVDVGSKTTIRVVNSQVVTKPEFDFTRAPIFRNVTIAAWDPGKYNGTLEDWLTSADYDLFSNYE 340
            .:.|||||||||::|||:|| .|..|.:..::....:..|||..|:..:..|....||:.|..|:
  Rat   216 FQQDVGSKTTIRLMNSQLVT-TEKRFLKDSLYTEGILIVWDPSVYHADIPKWYQKPDYNFFETYK 279

  Fly   341 LYRRRYPKSRAFLIDPHSVWRLWQSLQMFAGNRPISKNPPSSGFIGLALLLPHCPQVDFVEYVPS 405
            .|||..|....:::.|...|.||..:|..:.:. |..||||||.:|:.:::..|.|||..|::||
  Rat   280 SYRRLNPSQPFYILKPQMPWELWDIIQEISADL-IQPNPPSSGMLGIIIMMTLCDQVDIYEFLPS 343

  Fly   406 TRLNGRCHYYSKEMNSACTFGSWHPLAAEKLMALDMNMAEDDDMSVF 452
            .|....|:|:.|..:||||.|::|||..||.|...:|...|:|:.:|
  Rat   344 KRKTDVCYYHQKFFDSACTMGAYHPLLFEKNMVKHLNEGTDEDIYLF 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 Glyco_transf_29 224..437 CDD:279159 89/212 (42%)
St6gal1NP_001106815.1 Catalytic (soluble form). /evidence=ECO:0000305|PubMed:3121604 63..403 118/344 (34%)
Glyco_transf_29 166..379 CDD:395627 90/214 (42%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P15907 319..321 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 198 1.000 Domainoid score I2990
eggNOG 1 0.900 - - E1_KOG2692
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 202 1.000 Inparanoid score I3684
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D231534at33208
OrthoFinder 1 1.000 - - FOG0002913
OrthoInspector 1 1.000 - - otm45008
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46059
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1922
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.930

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