DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SiaT and St3gal1

DIOPT Version :9

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_033203.1 Gene:St3gal1 / 20442 MGIID:98304 Length:337 Species:Mus musculus


Alignment Length:256 Identity:57/256 - (22%)
Similarity:88/256 - (34%) Gaps:89/256 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 LRRKDAPFN---------KLPFGRLFPRQKLFRNVKDIKTCAIVSSAGSLAGSKLGRFIDTHDIV 265
            |:|:..|.|         :|..|.:.|  .|.:.:...:.||:|.::|:|..|..|..||:||.|
Mouse   101 LQRERKPNNLSDTVKELFRLVPGNVDP--MLNKRLVGCRRCAVVGNSGNLKDSSYGPEIDSHDFV 163

  Fly   266 MRFNHAPTQGHEVDVGSKTTIRVV----------NSQVVTKP----------------EFDFTRA 304
            :|.|.|||.|.|.||||:||..:|          |..:|..|                ....|..
Mouse   164 LRMNKAPTVGFEADVGSRTTHHLVYPESFRELGENVNMVLVPFKTTDLQWVISATTTGTITHTYV 228

  Fly   305 PI-----FRNVTIAAWDPGKYNGTLEDWLTSADYDLFSNYELYRRRYPKSRAFLIDPHSVWRLWQ 364
            |:     .:...|..:.|.......::||..            ..||                  
Mouse   229 PVPPKIKVKQEKILIYHPAFIKYVFDNWLQG------------HGRY------------------ 263

  Fly   365 SLQMFAGNRPISKNPPSSGFIGLALLLPHCPQVDFVEYVPSTRLNGRCHYYSKEMNSACTF 425
                           ||:|.:.:...:..|.:||...:...::  |..|:|.:...||..|
Mouse   264 ---------------PSTGILSIIFSIHICDEVDLYGFGADSK--GNWHHYWENNPSAGAF 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 Glyco_transf_29 224..437 CDD:279159 51/233 (22%)
St3gal1NP_033203.1 Glyco_transf_29 80..335 CDD:395627 57/256 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2692
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.