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Protein Alignment SiaT and St8sia2

DIOPT Version :9

Sequence 1:	NP_523853.1	Gene:	SiaT / 37950	FlyBaseID:	FBgn0035050	Length:	474	Species:	Drosophila melanogaster
Sequence 2:	NP_476497.1	Gene:	St8sia2 / 117523	RGDID:	621843	Length:	375	Species:	Rattus norvegicus

Alignment Length:	389	Identity:	88/389 - (22%)
Similarity:	142/389 - (36%)	Gaps:	95/389 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly    79 GNGTTGHRVPRSVFHVRWNPNEKFIVESRENPAINSSKLAPHPRLKVSKNTKLTLSPKLYLCHDK 143
            |.||           :|...|......:|....||.|.| |....:.:::.|.::.|       .
  Rat    37 GRGT-----------IRSAVNSLHSKSNRAEVVINGSSL-PAVADRSNESLKHSIQP-------A 82

  Fly   144 HSELCHNKTQQFRQRIVRAFEKAMVESVN-ESQANHYNVDYKPVFGDSFEEQYYPSTCLVMEAGV 207
            .|:..||:|...|.|      |.:::.:: |...:......||  ||.                :
  Rat    83 SSKWRHNQTLSLRIR------KQILKFLDAEKDISVLKGTLKP--GDI----------------I 123

  Fly   208 RVLRRKDAPFN-KLPFGRLFPRQKLFRNVKDIKTCAIVSSAGSLAGSKLGRFIDTHDIVMRFNHA 271
            ..:..:|:..| ......|.||....:| |..:|||||.::|.|..|..|:.||||..|:|.|.|
  Rat   124 HYIFDRDSTMNVSQNLYELLPRTSPLKN-KHFQTCAIVGNSGVLLNSGCGQEIDTHSFVIRCNLA 187

  Fly   272 PTQGHEVDVGSKTTIRVVNSQVVTKPEFDFTRAPIFRNVTIAAWDP------GKYNGTL------ 324
            |.|.:..|||.||.:..:|..|:.:         .|.::..|.|..      ...||::
  Rat   188 PVQEYARDVGLKTDLVTMNPSVIQR---------AFEDLVNATWREKLLQRLHGLNGSILWIPAF 243

  Fly   325 --------EDWLTSADYDLFSNYELYRRRYPKSRAFLIDPHSVWRLWQSLQMFAGNRPISKNPPS 381
                    .:|:.:.   :..::...|..||..|..    |:|...|.:      |:...|. |:
  Rat   244 MARGGKERVEWVNAL---ILKHHVNVRTAYPSLRLL----HAVRGYWLT------NKVHIKR-PT 294

  Fly   382 SGFIGLALLLPHCPQVDFVEYVP----STRLNGRCHYYSKEMNSACTFGSWH--PLAAEKLMAL 439
            :|.:...|....|.|:....:.|    ..:...:.|||........:..|.|  ||..:.|.:|
  Rat   295 TGLLMYTLATRFCNQIYLYGFWPFPLDQNQNPVKYHYYDSLKYGYTSQASPHTMPLEFKALKSL 358

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.