DRSC/TRiP Functional Genomics Resources

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Protein Alignment SiaT and st3gal5

DIOPT Version :10

Sequence 1:NP_523853.1 Gene:SiaT / 37950 FlyBaseID:FBgn0035050 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001165301.1 Gene:st3gal5 / 100329191 XenbaseID:XB-GENE-955106 Length:372 Species:Xenopus tropicalis


Alignment Length:346 Identity:75/346 - (21%)
Similarity:126/346 - (36%) Gaps:84/346 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 HDKHSELCHNKTQQFRQRIVRAFEKAMVESVNESQANHYNVDYKPVFGDSFEEQYYPSTCLVMEA 205
            |.::|........|...|:.||  |.....|.::|.       :|.|..:..::.:.|.   ...
 Frog    33 HGRNSAQAKGSLIQSHIRMYRA--KTFARDVLQAQC-------RPAFARTQMDRLFSSK---YTK 85

  Fly   206 GVRVLRRKDAPFNKL------PFG------------RLFPRQKLFRNV--KDIKTCAIVSSAGSL 250
            .:....:||...|:.      |||            .:.|...|.:.:  |..|.|.::.|.|.|
 Frog    86 NLSSFIKKDKSLNESLYKYEPPFGFRHYVDELSDLLEMMPEDGLPKELHSKHCKRCIVIGSGGIL 150

  Fly   251 AGSKLGRFIDTHDIVMRFNHAPTQGHEVDVGSKTTIRVVNSQVVTKPEFDFTRAPIF-------- 307
            .|.:||:.:|..|||:|.|:||..|:..|||:|||||:...:.....|.::..:.:|        
 Frog   151 HGLELGQMVDQFDIVIRLNNAPVHGYAQDVGNKTTIRMTYPEGAPVSEQEYQHSSLFVTVLFKHA 215

  Fly   308 ---------RNVTIAAWDPGKYNGTLEDW--LTSADYDLFSNYELYRRR-----YPKSRAFLIDP 356
                     :|..::||:...:...:.|.  |.|:.:.:.:...:....     :||       |
 Frog   216 DFRWLEAVLKNQKLSAWNRFFFWKRVTDKIPLNSSQFRVLNPLIIKETAIDILGFPK-------P 273

  Fly   357 HSVWRLWQSLQMFAGNRPISKNPPSSGFIGLALLLPHCPQVDFVEY-----VPSTRLNGRCHYYS 416
            ...|..|            .||.|:.|...:.|....|.:|:...:     .|...|    |||.
 Frog   274 QKRWLGW------------DKNVPTIGMTAVILATHLCDEVNLAGFGYDLSQPDASL----HYYD 322

  Fly   417 KEMNSACTFGSWHPLAAEKLM 437
            ....::......|.:..||.|
 Frog   323 NRCMNSMNDQPMHDVTKEKKM 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SiaTNP_523853.1 GT29_ST6GAL1_2 199..469 CDD:467696 63/288 (22%)
st3gal5NP_001165301.1 GT29_ST3GAL5 137..347 CDD:467711 54/230 (23%)

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