Protein Alignment Mmp1 and Mmp23

DIOPT Version :10

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: NP_446058.1
• Gene: Mmp23 / 94339
• RGDID: 620201
• Length: 391
• Species: Rattus norvegicus
• Alignment Length: 299
• Identity: 88/299 - (29%)
• Similarity: 122/299 - (40%)
• Gaps: 79/299 - (26%)

  Fly   104 SRSKRYALQGS--RWRVKNLTYKISKYPKR-LKRVDVDAEIGRAFAVWSEDTDLTFTR-KTSGPV 164
            :|.:||.|..:  ||...||||:|..:|:. |...:....:..||.:||:.:..:|.. ....|.
  Rat    75 TRRRRYTLTPARLRWDHFNLTYRILSFPRNLLSPEETRRGLAAAFRMWSDVSPFSFREVAPERPS 139

  Fly   165 HIEIKFVESEHGD------GDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRG-------- 215
            .::|.|....|.|      ...|||..|.|||||||..|| .||||:|.|.:|..|.
  Rat   140 DLKIGFYPVNHTDCLVSALHHCFDGPTGELAHAFFPPHGG-IHFDDSEYWVLGPTRYSWKKGVWL 203

  Fly   216 TNLFQVAAHEFGHSLGLSHSDQSSALM--APFYRGFEPVFKLDEDDKAAIQSLYG---------- 268
            |:|..|||||.||:|||.||.|..|||  ....||::   .|.:|:...:..|||
  Rat   204 TDLVHVAAHEIGHALGLMHSQQDQALMHLNATLRGWK---ALSQDELWGLHRLYGCLDRIFVCTS 265

  Fly   269 -----------RKTNQLRPTNV-------YP--ATTQRPYSPPKVPLDDSICKDSKVDTLFNSAQ 313
                       |...:|.|.:.       :|  |||..|               ::..|.| ..:
  Rat   266 WARKGFCDVRQRLMKRLCPRSCDFCYEFPFPTVATTTSP---------------TRTKTRF-VRE 314

  Fly   314 GETYAF---------KGDKYYKLTTDSVEEGYPQLISKG 343
            |....|         ||..|:....:.:|..||..::.|
  Rat   315 GRNMTFHCGQKILHKKGKVYWYKDQEPLEFSYPGYLALG 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:460223
		Peptidase_M10	115..268	CDD:425668	63/170 (37%)
		HX	298..493	CDD:238046	11/55 (20%)
Mmp23	NP_446058.1	ZnMc_MMP	88..255	CDD:239805	63/170 (37%)
		ShKT	256..290	CDD:214586	3/33 (9%)
		Ig_3	312..374	CDD:464046	9/42 (21%)