| Sequence 1: | NP_726473.2 | Gene: | Mmp1 / 37949 | FlyBaseID: | FBgn0035049 | Length: | 584 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_112316.2 | Gene: | Mmp2 / 81686 | RGDID: | 621316 | Length: | 662 | Species: | Rattus norvegicus |
| Alignment Length: | 684 | Identity: | 177/684 - (25%) |
|---|---|---|---|
| Similarity: | 242/684 - (35%) | Gaps: | 238/684 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 11 VVGTLFSIMAAAQSAP---------VSTTTQAEI---YLSQFGYLPASARNPASSGLHDQRTWV- 62
Fly 63 -SAIEEFQSFAGLNITGELDAETMKLMSLPRCGVRDRVGTGDSRSKRYALQGSRWRVKNLTYKIS 126
Fly 127 KYPKRLKRVDVDAEIGRAFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHA 191
Fly 192 FFP--VFGGDAHFDDAELWTIGS------------------------------------------ 212
Fly 213 ----------------------------------------------------------------- 212
Fly 213 ----------------------------------------------------------------- 212
Fly 213 --PRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDKAAIQSLYGRKTNQLR 275
Fly 276 PTNVYPATTQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLI 340
Fly 341 SKGWPGLPGNIDAAF-TYKNGKTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGIP---DHLDAAM 401
Fly 402 VWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPIS-NWEGVPNNLDAALKYT-NGYTYFFKGDK 464
Fly 465 YYRFHD-----ARFAVDSATPPFPRPTAHWWFGC 493 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Mmp1 | NP_726473.2 | PG_binding_1 | 32..88 | CDD:279773 | 16/60 (27%) |
| Peptidase_M10 | 115..268 | CDD:278824 | 76/328 (23%) | ||
| ZnMc_MMP | 115..268 | CDD:239805 | 76/328 (23%) | ||
| HX | 298..493 | CDD:238046 | 62/205 (30%) | ||
| Mmp2 | NP_112316.2 | PG_binding_1 | <70..97 | CDD:396175 | 9/26 (35%) |
| Cysteine switch. /evidence=ECO:0000250 | 100..107 | 4/12 (33%) | |||
| Collagenase-like 1 | 110..221 | 48/110 (44%) | |||
| Peptidase_M10 | 118..446 | CDD:395334 | 76/328 (23%) | ||
| Collagen-binding | 222..396 | 1/173 (1%) | |||
| FN2 | 226..274 | CDD:128373 | 0/47 (0%) | ||
| FN2 | 284..332 | CDD:128373 | 0/47 (0%) | ||
| FN2 | 342..390 | CDD:128373 | 0/47 (0%) | ||
| Collagenase-like 2 | 397..467 | 33/70 (47%) | |||
| Required for inhibitor TIMP2 binding. /evidence=ECO:0000250 | 414..662 | 83/268 (31%) | |||
| HX | 468..662 | CDD:238046 | 63/213 (30%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 151 | 1.000 | Domainoid score | I4255 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG1565 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1075463at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR10201 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X44 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 7 | 6.920 | |||||