Protein Alignment Mmp1 and Hpx

DIOPT Version :10

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: NP_445770.1
• Gene: Hpx / 58917
• RGDID: 62040
• Length: 460
• Species: Rattus norvegicus
• Alignment Length: 254
• Identity: 69/254 - (27%)
• Similarity: 105/254 - (41%)
• Gaps: 37/254 - (14%)

  Fly   294 PLDDSI--CKDS-KVDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAF 355
            |..|.|  |.|: ..|.......|....|||:..::     ...|..:|||:.|.....::||||
  Rat    42 PDSDVIEHCSDAWSFDATTMDHNGTMLFFKGEFVWR-----GHSGIRELISERWKNPVTSVDAAF 101

  Fly   356 TYKNGKTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGIPDHLDAAMVWGGNGK-----IYFFKGS 415
            ...: ..:..|..:.|.|...:.:..|||...|...|||...||| |....|:     :.||:|:
  Rat   102 RGPD-SVFLIKEDKVWVYPPEKKENGYPKLFQEESPGIPYPPDAA-VECHRGECQSEGVLFFQGN 164

  Fly   416 KFWRFDPAKRPPVKASYPKPISNWEGVPNNLDAALKYTNGYTYFFKGDKYYRFHDARFAVDSATP 480
            :.|.:|.|.|...:.|:|        ...|..|||::...| |.|:|:|:.||:    .|....|
  Rat   165 RKWFWDFATRTQKERSWP--------AVGNCTAALRWLERY-YCFQGNKFLRFN----PVTGEVP 216

  Fly   481 P-FPRPTAHWWFGCKNTPSSTGNIVEGSDNEFEQHSMIP--HADDGNGDDFDAAVGDHQ 536
            | :|.....::..|..  ...|.:..|:.:....|.|..  :||.|    ..|.:.||:
  Rat   217 PRYPLDARDYFISCPG--RGHGKLRNGTAHGNSTHPMHSRCNADPG----LSALLSDHR 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:460223
		Peptidase_M10	115..268	CDD:425668
		HX	298..493	CDD:238046	56/203 (28%)
Hpx	NP_445770.1	HX	52..230	CDD:238046	54/197 (27%)
		Hemopexin 1	53..93		10/44 (23%)
		Hemopexin 2	94..138		11/44 (25%)
		Hemopexin 3	139..183		15/52 (29%)
		Hemopexin 4	184..230		15/50 (30%)
		Hemopexin 5	257..302		6/17 (35%)
		HX	269..458	CDD:238046	0/1 (0%)
		Hemopexin 6	303..350
		Hemopexin 7	355..394
		Hemopexin 8	398..448