Protein Alignment Mmp1 and vtnb

DIOPT Version :9

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: NP_001132933.1
• Gene: vtnb / 403026
• ZFINID: ZDB-GENE-041116-1
• Length: 449
• Species: Danio rerio
• Alignment Length: 363
• Identity: 102/363 - (28%)
• Similarity: 135/363 - (37%)
• Gaps: 140/363 - (38%)

  Fly   270 KTNQLRPTNVYPATTQRPYSPPKVPLD-DSI-CKDSKVDTLFNSAQGETYAFKGDKYYKLTTDSV 332
            :|| |..|...|.||..||..|..|.| |:: |.....|.......|..:||:||.:::|...||
Zfish    81 ETN-LTVTTALPTTTAAPYVSPTAPPDPDAVTCSRRTFDAFMQLKNGSIFAFRGDYFFELDDRSV 144

  Fly   333 EEGYPQLISKGWPGLPGNIDAAFTYKN--GKTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGIPD 395
            ..|||:||...| |:.|.||||||..|  ||||.|||.:|||:.|..:|..||::|:.||..|||
Zfish   145 MPGYPKLIKDVW-GINGPIDAAFTRINCQGKTYIFKGNKYWRFDGDVLDEDYPRDIAVGFEKIPD 208

  Fly   396 HLDAAMV-----WGGNGKIYFFKGSKFWRFDPAKRPP-------VKAS-----------Y----- 432
            .:|||..     ..|..|:|||||.::::::...:|.       .|:|           |
Zfish   209 DVDAAFAIPAPGHHGREKVYFFKGDQYYQYEFKHQPSHEECDRMTKSSPSVAFTRYTDLYCDFDI 273

  Fly   433 --------------PKPIS-NWEGVPNNLDAA--------------------------------- 449
                          |:.|| :|.|:...:|||
Zfish   274 FDLVFQGAQGHHKGPRFISKDWIGIKPPVDAAMVGRLYVNSSPSPSPSTSLSRGQNTRRRLRGSK 338

  Fly   450 -------------LKYTNGY--------------------------------------------- 456
                         |.|...|
Zfish   339 ARVSRSLFWEDFGLDYEERYFGTEKQGKKQKKGRGRRPSLFDMSYDPMDYVDVEVVQEKATPVQN 403

  Fly   457 TYFFKGDKYYRFHDARFAVDSATPPFPRPTAHWWFGCK 494
            .||||.|||||.......:|..|||:||....:|.|||
Zfish   404 VYFFKKDKYYRVDLQTKRIDRVTPPYPRSIGKYWLGCK 441

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:279773
		Peptidase_M10	115..268	CDD:278824
		ZnMc_MMP	115..268	CDD:239805
		HX	298..493	CDD:238046	86/331 (26%)
vtnb	NP_001132933.1	Somatomedin_B	19..56	CDD:279385
		HX	112..440	CDD:238046	86/328 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1565
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810