Protein Alignment Mmp1 and Mmp28

DIOPT Version :10

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: NP_001073357.1
• Gene: Mmp28 / 303384
• RGDID: 1311573
• Length: 525
• Species: Rattus norvegicus
• Alignment Length: 512
• Identity: 175/512 - (34%)
• Similarity: 257/512 - (50%)
• Gaps: 78/512 - (15%)

  Fly    32 QAEIYLSQFGYL-PASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGV 95
            :||.:|.::||| ...::.|||:...|      ||.|||..:.|.|:|.||..|::.|:.|||||
  Rat    35 EAEAFLEKYGYLSEQGSKVPASTQFSD------AIREFQWVSQLPISGVLDRATLRQMTRPRCGV 93

  Fly    96 RDRVGTGDS--------------------RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAE 140
            .|.    ||                    |.||:|..|.:|..::|:|::..:||.|....|...
  Rat    94 ADT----DSHETWTERIRALLAGHRAKMRRKKRFAKPGHKWYKQHLSYRLVNWPKSLPEPAVRGA 154

  Fly   141 IGRAFAVWSEDTDLTF-TRKTSGPVHIEIKFVESEHGDG--DAFDGQGGTLAHAFFPVFGGDAHF 202
            :..||.:||..:.|.| ....:||..|.:.|.:.:|.||  :||||.||.|||||.| ..|:|||
  Rat   155 VRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLP-RRGEAHF 218

  Fly   203 DDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDKAAIQSLY 267
            |..|.|::...||.|||.|.|||.||:|||:||....|||||:|:.......|..||..|:|:||
  Rat   219 DQDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQNLY 283

  Fly   268 GRKTNQLRPTNV-------------YPATTQRPYS-PPKVPLDDSICKDSKVDTLFNSAQGETYA 318
            |:...:...|.:             :.:.::||.: .||      .| .|..|.:....|...|.
  Rat   284 GKPLGRSVATQLPGKIFTDFEAWDPHNSQSRRPETRGPK------YC-HSSFDAITVDGQWRLYV 341

  Fly   319 FKGDKYYKLTTD-SVEEGYPQLISKGWPGLPGNID-AAFTYKNGKTYFFKGTQYWRYQGRQMDGV 381
            |||..::::|.| :|.|.:|  :.|.|||||.:|: ||.:.::|..:||||.:.||:||.:  .|
  Rat   342 FKGSHFWEVTADGNVSEPHP--LQKRWPGLPSSIEAAAVSLEDGDFFFFKGNRCWRFQGTK--SV 402

  Fly   382 YPKEISEGFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPISNWEGVPNNL 446
            :.:....|  |:|.|.|||:.:....::..||||:::....... .|:..||:.:.:|.|||..:
  Rat   403 FAQLCRAG--GLPRHPDAALFFPPLRRLVLFKGSRYYVLARGGM-QVEPYYPRSLRDWAGVPEEV 464

  Fly   447 DAALKYTNGYTYFFKGDKYYRFHDARFAVDSATPPFPRPTAHW-----WFGCKNTPS 498
            ..||...:|...||:.|.|:....|:..|.|        :..|     |.||.|..|
  Rat   465 SGALPRPDGSIIFFRDDHYWHLDQAKLRVTS--------SGRWATELSWMGCWNANS 513

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:460223	21/56 (38%)
		Peptidase_M10	115..268	CDD:425668	67/155 (43%)
		HX	298..493	CDD:238046	62/201 (31%)
Mmp28	NP_001073357.1	PG_binding_1	34..86	CDD:460223	21/56 (38%)
		ZnMc_MMP	129..284	CDD:239805	67/155 (43%)
		HX	321..508	CDD:238046	64/208 (31%)