Sequence 1: | NP_726473.2 | Gene: | Mmp1 / 37949 | FlyBaseID: | FBgn0035049 | Length: | 584 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038938724.1 | Gene: | Mmp1b / 300338 | RGDID: | 1306843 | Length: | 460 | Species: | Rattus norvegicus |
Alignment Length: | 503 | Identity: | 159/503 - (31%) |
---|---|---|---|
Similarity: | 225/503 - (44%) | Gaps: | 74/503 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 LFSIMAAAQSAPVSTT-TQAEI-----YLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAG 73
Fly 74 LNITGELDAETMKLMSLPRCGVRDRVGTGDSRSKRYAL--QGSRWRVKNLTYKISKYPKRLKRVD 136
Fly 137 VDAEIGRAFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAF--FPVFGGD 199
Fly 200 AHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDKAAIQ 264
Fly 265 SLYGRKTNQLRPTNVYPATTQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLTT 329
Fly 330 DSVEEGYPQLISKGWPGLPGNIDAAFTYK-NGKTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGI 393
Fly 394 PD---HLDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPIS-NWEGVPNNLDAALKYTN 454
Fly 455 GYTYFFKGDKYYRFHDA---------RFAVDSATPPFPRPTAHWWFGC 493 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mmp1 | NP_726473.2 | PG_binding_1 | 32..88 | CDD:279773 | 13/60 (22%) |
Peptidase_M10 | 115..268 | CDD:278824 | 70/154 (45%) | ||
ZnMc_MMP | 115..268 | CDD:239805 | 70/154 (45%) | ||
HX | 298..493 | CDD:238046 | 57/208 (27%) | ||
Mmp1b | XP_038938724.1 | PG_binding_1 | 27..77 | CDD:396175 | 10/55 (18%) |
Peptidase_M10 | 103..256 | CDD:395334 | 70/153 (46%) | ||
HX | 269..460 | CDD:238046 | 59/225 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1075463at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000127 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10201 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X44 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.020 |