Sequence 1: | NP_726473.2 | Gene: | Mmp1 / 37949 | FlyBaseID: | FBgn0035049 | Length: | 584 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062029.2 | Gene: | Vtn / 29169 | RGDID: | 3967 | Length: | 478 | Species: | Rattus norvegicus |
Alignment Length: | 414 | Identity: | 110/414 - (26%) |
---|---|---|---|
Similarity: | 154/414 - (37%) | Gaps: | 170/414 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 252 VFKLDEDD--------------KAAIQS--------LYGRKTNQLRPTNVYP---ATTQRP---- 287
Fly 288 --YSPPKVPLD--------DSICKDSKVDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISK 342
Fly 343 GWPGLPGNIDAAFTYKN--GKTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGIPDHLDAAMV--- 402
Fly 403 --WGGNGKIYFFKGSKFWRFDPAKRPPVK------------------------------------ 429
Fly 430 -ASYPKPIS-NWEGVPNNLDAALK---YTNGYT-------------------------------- 457
Fly 458 -----------------------------------------------YFFKGDKYYRFHDARFAV 475
Fly 476 DSATPPFPRPTAHWWFGCKNTPSS 499 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mmp1 | NP_726473.2 | PG_binding_1 | 32..88 | CDD:279773 | |
Peptidase_M10 | 115..268 | CDD:278824 | 7/37 (19%) | ||
ZnMc_MMP | 115..268 | CDD:239805 | 7/37 (19%) | ||
HX | 298..493 | CDD:238046 | 90/321 (28%) | ||
Vtn | NP_062029.2 | SO | 20..62 | CDD:197571 | |
HX | 152..473 | CDD:238046 | 90/321 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1565 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |