Protein Alignment Mmp1 and Mmp17

DIOPT Version :9

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: XP_017453997.1
• Gene: Mmp17 / 288626
• RGDID: 1311541
• Length: 592
• Species: Rattus norvegicus
• Alignment Length: 538
• Identity: 175/538 - (32%)
• Similarity: 260/538 - (48%)
• Gaps: 91/538 - (16%)

  Fly    15 LFSIMAAAQSAPVSTTTQAE------IYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAG 73
            |..:..||.....:...:||      .:||:|||||.:  :||:..|..|.....||...|.|.|
  Rat    27 LLMLALAAHGGCAAPAPRAEDLSLGVEWLSKFGYLPPA--DPATGQLQTQEELSKAITAMQQFGG 89

  Fly    74 LNITGELDAETMKLMSLPRCGVRDRVGTGDSRSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVD 138
            |..||.||..|:.||..|||.:.|......||.:|.....::|..:||::::..:|:       |
  Rat    90 LETTGILDEATLALMKTPRCSLPDLPLGAQSRRRRQTPLPTKWSKRNLSWRVRTFPR-------D 147

  Fly   139 AEIGR---------AFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFP 194
            :.:||         |..|||:.|.|.|.........|:|.|.:::|.||..|||.|||:||||||
  Rat   148 SPLGRDTVRALMYYALKVWSDITPLNFHEVAGNMADIQIDFSKADHNDGYPFDGPGGTVAHAFFP 212

  Fly   195 ---VFGGDAHFDDAELWTIGS-------PRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGF 249
               ...||.||||.|.||..|       ..|.:||.||.|||||::||||....|::|.|:|:|
  Rat   213 GDHHTAGDTHFDDDEAWTFRSSVSASSDAHGMDLFAVAVHEFGHAIGLSHVAAPSSIMQPYYQG- 276

  Fly   250 EPV-----FKLDEDDKAAIQSLYGRKTNQLRPTNVYPATTQRPYSPPKVPLD------------- 296
             ||     :.|..:|:..:..|||.: ..:.||  ....|..|..||.:|..
  Rat   277 -PVGDPLRYGLPYEDRVRVWQLYGVR-ESVSPT--AQLDTPEPEEPPLLPEPPNNRSSTPPQKDV 337

  Fly   297 --------DSICKDSKVDTLFNSAQGETYAFKGDKYYKLTTD----SVEEGYPQLISKGWPGLP- 348
                    |::.:          .:||.:.|||..:::||.|    |::   |..:.:.|.|||
  Rat   338 PHRCTAHFDAVAQ----------IRGEAFFFKGKYFWRLTRDRHLVSLQ---PAQMHRFWRGLPL 389

  Fly   349 --GNIDAAF-TYKNGKTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGIPDHLDAAMVWGGNGKIY 410
              .::||.: ...:.|..||||.:||.::...::..||:.:|: |:..|..:||...|..|.:.|
  Rat   390 HLDSVDAVYERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSD-FSLPPGGIDAVFSWAHNDRTY 453

  Fly   411 FFKGSKFWRFDPAKRPPVKASYPKPISNWEGVPNNLDAALKYTNGYTYFFKGDKYYRFHDARFAV 475
            |||...:||:|...| .:...||.....|.|||:.||.|:::::|.:|||:|.:|::..|...
  Rat   454 FFKDQLYWRYDDHTR-RMDPGYPAQGPLWRGVPSVLDDAMRWSDGASYFFRGQEYWKVLDGEL-- 515

  Fly   476 DSATPPFPRPTAHWWFGC 493
             .|.|.:|:.||..|..|
  Rat   516 -EAAPGYPQSTARDWLVC 532

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:279773	24/61 (39%)
		Peptidase_M10	115..268	CDD:278824	66/176 (38%)
		ZnMc_MMP	115..268	CDD:239805	66/176 (38%)
		HX	298..493	CDD:238046	62/202 (31%)
Mmp17	XP_017453997.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1075463at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm44496
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X44
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.920