Protein Alignment Mmp1 and zmp-4

DIOPT Version :9

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: NP_506678.2
• Gene: zmp-4 / 179991
• WormBaseID: WBGene00012364
• Length: 472
• Species: Caenorhabditis elegans
• Alignment Length: 480
• Identity: 118/480 - (24%)
• Similarity: 185/480 - (38%)
• Gaps: 108/480 - (22%)

  Fly    32 QAEIYLSQFGY-LPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGV 95
            :|::||.:||| :|...:|..:.....::....|:..|||......:|::|..|...|:..||..
 Worm    36 EAKVYLFKFGYMIPEPHQNVKTIQEPSEKQTKDALIRFQSAFLYYSSGDVDVPTQAKMNEWRCAN 100

  Fly    96 RDRVGTGD---SRSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSEDTDLTFT 157
            .| :..|.   ..||:     ..|..|:||||:...|..|.:..:.:....||..|:..:...|.
 Worm   101 ND-MDKGQPIPPASKK-----ELWTKKSLTYKVVNTPNTLSQAQIRSAAHEAFEQWTRASGFKFV 159

  Fly   158 RKTSGPVHIEIKFVESEHGDGDAFDGQGGTL---AHAFFPVFGGDAH--FDDAELWTIGS--PRG 215
            ..|.....|.|.|          :|.....|   ..|..||   ::|  .|..:.|...|  |.|
 Worm   160 ETTGATPDITITF----------YDVPQSNLRIAGSASKPV---NSHIILDKNQEWAYKSQAPMG 211

  Fly   216 TNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRG--FEPVFK-----------LDEDDKAAIQSLY 267
            .:|:....||.||.|||.|:         ||||  ..|:||           :...|:.||:.:|
 Worm   212 ISLYHTLLHEIGHILGLPHT---------FYRGSIMHPIFKPVLLPHGTVDTVPNVDRLAIRKIY 267

  Fly   268 GRKTNQLRPTNVYPATTQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLTTDS- 331
            |              .:...:|.|...:|.|.| ...:|::......|...|:.:|.|||....
 Worm   268 G--------------LSSVDHSTPSSDVDRSKC-PKHLDSVVAINDQEWLFFRSNKVYKLNNRKF 317

  Fly   332 VEEGYPQLISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRYQGRQMDGV-------YPKEISEG 389
            |:.|.|  |.:.:|..|..::|..:.......|.:.|.|    |.:.|||       ||||:.:.
 Worm   318 VDSGRP--IQQVFPRGPQFVNATVSSGPLTLLFVERTIY----GYEYDGVQFTEAPNYPKELHDR 376

  Fly   390 FTGIPDHLDAAMVWG----GNGKIYFFKGSKFWRFDPAKRPPV----KASYPKPISNWEGVPNNL 446
            ....|.        |    .||.:....|:.|..::..:..|.    |..|      :..:|.::
 Worm   377 VLFYPQ--------GAFPLNNGSVILLSGNVFATYNVQQNAPSFLNDKNRY------FPNLPEDI 427

  Fly   447 DAALKYTNGYTYFFKGDKYYRFHDA 471
            .:.::.|.|:|     |.||.|.:|
 Worm   428 KSGIEKTQGFT-----DAYYMFDEA 447

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:279773	15/56 (27%)
		Peptidase_M10	115..268	CDD:278824	46/172 (27%)
		ZnMc_MMP	115..268	CDD:239805	46/172 (27%)
		HX	298..493	CDD:238046	45/190 (24%)
zmp-4	NP_506678.2	Peptidase_M10	118..268	CDD:334067	46/171 (27%)
		HX	283..471	CDD:238046	45/191 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1565
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1075463at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10201
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.920