Protein Alignment Mmp1 and zmp-6

DIOPT Version :10

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: NP_498599.1
• Gene: zmp-6 / 176025
• WormBaseID: WBGene00020646
• Length: 279
• Species: Caenorhabditis elegans
• Alignment Length: 254
• Identity: 87/254 - (34%)
• Similarity: 122/254 - (48%)
• Gaps: 37/254 - (14%)

  Fly    99 VGTGDSRSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEI-----GRAFAVWSEDTDLTFTR 158
            :|.| ||.|||.::..||:...||:::    :....:|.|..|     .|||..||..:.:.|..
 Worm    33 IGFG-SREKRYVIRAKRWKKHTLTWQL----QTQNLLDPDVFIVRNTMHRAFNEWSTVSSVDFRE 92

  Fly   159 -----KTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNL 218
                 .|..|..|.|.|.:.||.||..||||.|.:||||:| ..|..|||..|.|::.|..|.||
 Worm    93 IPPDLVTKQPPDIYIAFEKGEHSDGFPFDGQDGVVAHAFYP-RDGRLHFDAEEQWSLNSVEGVNL 156

  Fly   219 FQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDKAAIQSLY---------GRKTNQL 274
            ||.|.||.||.|||.||....|.|....|.::|.|.|.:||..||:||:         |.:.|
 Worm   157 FQTAVHEIGHLLGLEHSMDVRAAMFAAKRPYDPAFTLGDDDVRAIRSLFPINETDANSGSEEN-- 219

  Fly   275 RPTNVYPATTQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLTTDSVE 333
               :..|.||.:|.|.     ::.|  |.:.:..|:::...|.:...|.::.....|:|
 Worm   220 ---SEDPVTTVKPISK-----EEGI--DEENNDPFDASSTTTSSSSPDSFFPFPLPSIE 268

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:460223
		Peptidase_M10	115..268	CDD:425668	66/171 (39%)
		HX	298..493	CDD:238046	7/36 (19%)
zmp-6	NP_498599.1	ZnMc_MMP	48..205	CDD:239805	65/161 (40%)