DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp1 and Mmp7

DIOPT Version :10

Sequence 1:NP_726473.2 Gene:Mmp1 / 37949 FlyBaseID:FBgn0035049 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_034940.3 Gene:Mmp7 / 17393 MGIID:103189 Length:264 Species:Mus musculus


Alignment Length:249 Identity:100/249 - (40%)
Similarity:125/249 - (50%) Gaps:31/249 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QAEIYLSQFGYLPASARNPASSGLHDQRT-----WVSAIEEFQSFAGLNITGELDAETMKLMSLP 91
            ||:.||.:|  .|           ||.:|     .|..::|.|.|.||.:||:|....|::|..|
Mouse    34 QAQNYLRKF--YP-----------HDSKTKKVNSLVDNLKEMQKFFGLPMTGKLSPYIMEIMQKP 85

  Fly    92 RCGVRDRVGTGDSRSKRYAL--QGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSEDTDL 154
            ||||.|        ...|:|  ...:|..:.:||:|..|...|.|:.||..:.:|..:||....|
Mouse    86 RCGVPD--------VAEYSLMPNSPKWHSRIVTYRIVSYTSDLPRIVVDQIVKKALRMWSMQIPL 142

  Fly   155 TFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFF--PVFGGDAHFDDAELWTIGSPRGTN 217
            .|.|.:.|...|.|.|...:|||...|||.|.||.|||.  |..|||||||..|.||.|...|.|
Mouse   143 NFKRVSWGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGGDAHFDKDEYWTDGEDAGVN 207

  Fly   218 LFQVAAHEFGHSLGLSHSDQSSALMAPFY-RGFEPVFKLDEDDKAAIQSLYGRK 270
            ....|.||||||||||||.....:|.|.| |.:...|.|.:||.|.||.|||::
Mouse   208 FLFAATHEFGHSLGLSHSSVPGTVMYPTYQRDYSEDFSLTKDDIAGIQKLYGKR 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp1NP_726473.2 PG_binding_1 32..88 CDD:460223 19/60 (32%)
Peptidase_M10 115..268 CDD:425668 70/155 (45%)
HX 298..493 CDD:238046
Mmp7NP_034940.3 PG_binding_1 31..82 CDD:460223 19/60 (32%)
Cysteine switch. /evidence=ECO:0000250 85..92 6/14 (43%)
Peptidase_M10 103..259 CDD:425668 70/155 (45%)
Blue background indicates that the domain is not in the aligned region.

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