Protein Alignment Mmp1 and Mmp3

DIOPT Version :9

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: NP_034939.1
• Gene: Mmp3 / 17392
• MGIID: 97010
• Length: 479
• Species: Mus musculus
• Alignment Length: 452
• Identity: 179/452 - (39%)
• Similarity: 229/452 - (50%)
• Gaps: 45/452 - (9%)

  Fly    57 DQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVRDRVGTGDSRSKRYALQGS-RWRVKN 120
            |....|..|:|.|.|.||.:||:||:.||:||..|||||.| || |.|     ...|| :||..:
Mouse    58 DSSLIVKKIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD-VG-GFS-----TFPGSPKWRKSH 115

  Fly   121 LTYKISKYPKRLKRVDVDAEIGRAFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQG 185
            :||:|..|...|.|..||:.|.:|..||.|.|.|||:|.:.|...|.|.|...||||...|||.|
Mouse   116 ITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGEADIMISFAVGEHGDFVPFDGPG 180

  Fly   186 GTLAHAFFPVFG--GDAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRG 248
            ..||||:.|..|  |||||||.|.|| ....|||||.|||||.||||||.||.::.|||.|.|:.
Mouse   181 TVLAHAYAPGPGINGDAHFDDDERWT-EDVTGTNLFLVAAHELGHSLGLYHSAKAEALMYPVYKS 244

  Fly   249 FEPV--FKLDEDDKAAIQSLYGRKTNQLRPTNVYPATTQRPYSPPKVPLDDSICKDSKVDTLFNS 311
            ...:  |.|.:||...||||||..|  ..|..:...|......|...|:..|......|.||
Mouse   245 STDLSRFHLSQDDVDGIQSLYGTPT--ASPDVLVVPTKSNSLEPETSPMCSSTLFFDAVSTL--- 304

  Fly   312 AQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNGKTYF-FKGTQYWRYQG 375
             :||...||...:::.:..:.|..: .|||..||.||.|:|||:...|..|.| |||.|:|..:|
Mouse   305 -RGEVLFFKDRHFWRKSLRTPEPEF-YLISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFWAIRG 367

  Fly   376 RQMDGVYPKEISEGFTGIP---DHLDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPIS 437
            .:....|||.|..  .|:|   ..:|||:......|.|||...|:|||| .|:..::..:|:.|:
Mouse   368 HEELAGYPKSIHT--LGLPATVKKIDAAISNKEKRKTYFFVEDKYWRFD-EKKQSMEPGFPRKIA 429

  Fly   438 -NWEGVPNNLDAALKYTNGYTYFFKGDKYYRFHDARFAVDSATPPFPRPTAH-----WWFGC 493
             ::.||.:.:||..: ..|:.|||.|.....|           .|..:...|     .||.|
Mouse   430 EDFPGVDSRVDAVFE-AFGFLYFFSGSSQLEF-----------DPNAKKVTHILKSNSWFNC 479

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:279773	14/30 (47%)
		Peptidase_M10	115..268	CDD:278824	79/156 (51%)
		ZnMc_MMP	115..268	CDD:239805	79/156 (51%)
		HX	298..493	CDD:238046	64/204 (31%)
Mmp3	NP_034939.1	PG_binding_1	30..89	CDD:279773	14/30 (47%)
		Peptidase_M10	110..266	CDD:278824	79/156 (51%)
		ZnMc_MMP	110..266	CDD:239805	79/156 (51%)
		HX	292..479	CDD:238046	64/206 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167838340
Domainoid	1	1.000	149	1.000	Domainoid score	I4397
eggNOG	1	0.900	-	-		E1_KOG1565
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1075463at2759
OrthoFinder	1	1.000	-	-		FOG0000127
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10201
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X44
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	7.850