DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp1 and Mmp1

DIOPT Version :10

Sequence 1:NP_726473.2 Gene:Mmp1 / 37949 FlyBaseID:FBgn0035049 Length:584 Species:Drosophila melanogaster
Sequence 2:XP_308849.4 Gene:Mmp1 / 1270173 VectorBaseID:AGAMI1_001178 Length:568 Species:Anopheles gambiae


Alignment Length:579 Identity:383/579 - (66%)
Similarity:444/579 - (76%) Gaps:34/579 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IVVGTLFSIMAAAQSAPVSTTTQAEIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGL 74
            ::||.    .||..::|||||.|||:||||||||....|||.|..|.||.||..||.||||||||
Mosquito    15 VLVGA----CAAGTASPVSTTPQAELYLSQFGYLSPKYRNPTSGNLLDQDTWEKAIMEFQSFAGL 75

  Fly    75 NITGELDAETMKLMSLPRCGVRDRVGTG-DSRSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVD 138
            |:|||||.|||:|||||||||:|:||.| |:||||||||||||:||:|||:|||||:||:|..||
Mosquito    76 NVTGELDGETMQLMSLPRCGVKDKVGFGSDTRSKRYALQGSRWKVKDLTYRISKYPRRLERTAVD 140

  Fly   139 AEIGRAFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVFGGDAHFD 203
            .||.:||.||||.|||.||.|.:|.|||:|:|.|:||||||.|||.|||||||:|||:|||||||
Mosquito   141 KEIAKAFGVWSEYTDLRFTPKKTGAVHIDIRFEENEHGDGDPFDGPGGTLAHAYFPVYGGDAHFD 205

  Fly   204 DAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDKAAIQSLYG 268
            |||.|||..||||||||||||||||||||||||..||||||||||::|||:||.||...||:|||
Mosquito   206 DAEQWTIDKPRGTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRGYDPVFRLDSDDIQGIQTLYG 270

  Fly   269 RKT-NQLRPTNVYPATTQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLTTDSV 332
            .|| |........|..|.||.:|.:  :|..:|...|:|.:||:|.|.|||||||||||||.::|
Mosquito   271 TKTRNPGGGAGATPTRTPRPKTPTE--MDSELCTSPKIDAIFNTADGSTYAFKGDKYYKLTENAV 333

  Fly   333 EEGYPQLISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGIPDHL 397
            .||||:.||.|||||||||||||||||||||||:||:|||||||.:||.|||||||||||:||||
Mosquito   334 AEGYPKKISDGWPGLPGNIDAAFTYKNGKTYFFQGTKYWRYQGRTIDGDYPKEISEGFTGVPDHL 398

  Fly   398 DAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPISNWEGVPNNLDAALKYTNGYTYFFKG 462
            ||||||||||||||:||||||||||.||||||::|||||||||||||::||||:||||||||||.
Mosquito   399 DAAMVWGGNGKIYFYKGSKFWRFDPLKRPPVKSTYPKPISNWEGVPNSVDAALQYTNGYTYFFKD 463

  Fly   463 DKYYRFHDARFAVDSATPPFPRPTAHWWFGCKNTPS---STGNI-VEGSDNEFEQHSMIPHADDG 523
            ||||||:|..|.||.:.|||||||||||:|||||||   :.||: ::.||.         |..|.
Mosquito   464 DKYYRFNDRTFTVDQSDPPFPRPTAHWWYGCKNTPSTFNTLGNVRLQKSDE---------HPYDI 519

  Fly   524 NGDDFDAAVGDHQSNDEPIVPEVAERTGNGAMSQSKLTSSSAVSTVITTILM--CLVSK 580
            .....|||..|.|       |:....:||||   |.:||.| ::|.:...|:  .|||:
Mosquito   520 GDLAQDAADTDDQ-------PDPDGYSGNGA---STITSVS-ITTALAGFLLGAYLVSR 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp1NP_726473.2 PG_binding_1 32..88 CDD:460223 39/55 (71%)
Peptidase_M10 115..268 CDD:425668 114/152 (75%)
HX 298..493 CDD:238046 154/194 (79%)
Mmp1XP_308849.4 None

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