Protein Alignment Mmp1 and mmp11

DIOPT Version :9

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: XP_004910638.1
• Gene: mmp11 / 100493314
• XenbaseID: XB-GENE-479265
• Length: 478
• Species: Xenopus tropicalis
• Alignment Length: 507
• Identity: 183/507 - (36%)
• Similarity: 255/507 - (50%)
• Gaps: 67/507 - (13%)

  Fly    21 AAQSAPVSTTTQAEIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGL---NITGELDA 82
            ||.|||:|.         .:..|....|.....||            .|:.:.|   :..|.|:|
 Frog    14 AAHSAPLSL---------MYPQLRTQERPHKDHGL------------LQTHSLLHYPHTNGLLNA 57

  Fly    83 ETMKLMSLPRCGVRD-----RVGTGDSRSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIG 142
            .:.:  :.|||||.|     ...:|.:|.||:.|.|.||...||||||.::|.:|.:|.|...|.
 Frog    58 RSSR--NPPRCGVPDIPVPLDSSSGRNRQKRFVLSGGRWDKTNLTYKIIRFPWQLSKVKVRRTIA 120

  Fly   143 RAFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPVF--GGDAHFDDA 205
            .|..||||.|.||||....|...|.|.|....|||...|||.||.|||||||..  .||.|||..
 Frog   121 EALMVWSEVTPLTFTEVHEGRSDIIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYD 185

  Fly   206 ELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVFKLDEDDKAAIQSLYGRK 270
            |.||||:..||:|.|||||||||.|||.||..|.:||:|||. |.....|..|||..||.|||..
 Frog   186 EAWTIGNNIGTDLLQVAAHEFGHMLGLQHSSVSKSLMSPFYT-FRYPLSLSADDKHGIQFLYGAP 249

  Fly   271 TNQLRPTNVYPATTQRPYSPPKVPLDDSICKDSKV-----DTLF------NSAQGETYAFKGDKY 324
                     :|.|   |...|:|.::....:.:::     |..:      ::.:||.:.||....
 Frog   250 ---------HPPT---PSPTPRVEVNQVENESNEIPAAEPDACYTNFDAVSTIRGELFFFKSGYV 302

  Fly   325 YKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRYQGR-QMDGVYPKEISE 388
            ::|....::.|||.|.|:.|.|:|..:||||....|..:||.|:|:|.:.|: |..|.:|  |::
 Frog   303 WRLRGGKLQNGYPALASRHWRGIPDTVDAAFEDSVGNIWFFYGSQFWVFDGKLQASGPFP--ITD 365

  Fly   389 GFTGIPDHLDAAMVWG--GNGKIYFFKGSKFWRFDPAKRPPVKASYPKPISNWEGVPNNLDAALK 451
            ....:| .:.||.|||  .|.|.|.|:|.::|||:|..| .|::.:.:.|.:|.|:|..:|||.:
 Frog   366 IGISVP-QIQAAFVWGTEKNKKTYLFRGGEYWRFNPETR-RVESWHSRNIGDWRGIPKGIDAAFQ 428

  Fly   452 YTNGYTYFFKGDKYYRFHDARFAVDSATPPFPRPTAHWWFGCKNTPSSTGNI 503
            ...||.||.||.:|::|...:..|...   :|...:..:|.|..:..|..::
 Frog   429 DEQGYAYFVKGRQYWKFDPFKVRVMEG---YPHLISRDFFNCHASSISVNSL 477

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:279773	9/58 (16%)
		Peptidase_M10	115..268	CDD:278824	83/154 (54%)
		ZnMc_MMP	115..268	CDD:239805	83/154 (54%)
		HX	298..493	CDD:238046	64/208 (31%)
mmp11	XP_004910638.1	Peptidase_M10	93..247	CDD:334067	83/154 (54%)
		HX	277..467	CDD:238046	64/196 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	152	1.000	Domainoid score	I4297
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1075463at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10201
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X44
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	6.020