Protein Alignment Mmp1 and mmp20a

DIOPT Version :10

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: XP_017206678.3
• Gene: mmp20a / 100329766
• ZFINID: ZDB-GENE-100603-2
• Length: 468
• Species: Danio rerio
• Alignment Length: 489
• Identity: 166/489 - (33%)
• Similarity: 222/489 - (45%)
• Gaps: 62/489 - (12%)

  Fly    21 AAQSAPVSTTTQAEIYLSQFGYLPASARNP-ASSGLHDQRTWVSAIEEFQSFAGLNITGELDAET 84
            |.||........||.||..|.:|.....|. .:..:.|:      |...|.|..|..|..||.:|
Zfish    25 ALQSCTQEDFQHAEEYLRHFYHLKMRVYNKRRAERMKDK------IRAMQHFFDLKETAFLDHKT 83

  Fly    85 MKLMSLPRCGVRDRVGTGDSRSKRYALQGSR--WRVKNLTYKISKYPKRLKRVDVDAEIGRAFAV 147
            :..|...||||.|        .:.::....|  |:...:||:|:::...|:..:|:..:..|..:
Zfish    84 LNGMKEARCGVPD--------VENFSFYPGRPKWKSNIITYRIARFTPDLRPEEVENSLHLALKI 140

  Fly   148 WSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFP--VFGGDAHFDDAELWTI 210
            ||:...|.|.:...|...|...|....|||...|||.||.|||||.|  ..|||.||||.|:||:
Zfish   141 WSDAAPLKFVQIKEGRADITFSFNSKAHGDFFPFDGPGGVLAHAFEPGEGLGGDVHFDDDEIWTV 205

  Fly   211 GSPR-GTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFE-PVFKLDEDDKAAIQSLYGRKTNQ 273
            |..| |.|||.|||||.|||||||||...:|||.|.|:... ..:||..||...||:|||:||.|
Zfish   206 GRGRPGYNLFTVAAHELGHSLGLSHSKDPTALMYPKYKFINAATYKLPRDDTLGIQALYGKKTRQ 270

  Fly   274 LRPTNVYPATTQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYAFKGDKYYKLTT-----DSVE 333
                       |....|.|.   |.|..|: |..|    :.|...||....:..|.     :.::
Zfish   271 -----------QELVIPNKC---DVISFDA-VTVL----EKEIIFFKNSYMWMRTNWRSYWNRLK 316

  Fly   334 EGYPQLISKGWPGLPGNIDAAFTYKNGK-TYFFKGTQYWRYQGRQMDGVYPKEISE-GFTGIPDH 396
            || ||  |...|.:|..||||:...:.: .|.|.|.:||..|..:....|...|.| ||..|...
Zfish   317 EG-PQ--SVFLPSIPSPIDAAYDIPSQRVAYVFTGPKYWVVQKLESKSYYYGSIYEFGFPEIVRQ 378

  Fly   397 LDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPI-SNWEGVPNNLDAALKYTNGYTYFF 460
            :|||:.....||.|||.|..::.:| .||..:...:|:.| :.|.|:...:|||.: .||..:.|
Zfish   379 IDAAVHVSEGGKTYFFTGDYYFSYD-EKRNVMDRGFPRKINTGWPGIVGKVDAAFE-LNGRVHLF 441

  Fly   461 KGDKYYRF-HDARFAVDSATPPFPRPTAHWWFGC 493
            ...|.:.| |..|......|        :.|.||
Zfish   442 CRSKSFIFSHQKRLLHTMNT--------NAWLGC 467

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:460223	16/56 (29%)
		Peptidase_M10	115..268	CDD:425668	71/158 (45%)
		HX	298..493	CDD:238046	59/203 (29%)
mmp20a	XP_017206678.3	PG_binding_1	30..85	CDD:460223	16/60 (27%)
		Peptidase_M10	108..265	CDD:425668	70/156 (45%)
		HX	276..467	CDD:238046	62/211 (29%)