Protein Alignment CG4806 and WHI4

DIOPT Version :9

• Sequence 1: NP_611955.2
• Gene: CG4806 / 37948
• FlyBaseID: FBgn0260456
• Length: 657
• Species: Drosophila melanogaster
• Sequence 2: NP_010057.1
• Gene: WHI4 / 851302
• SGDID: S000002383
• Length: 649
• Species: Saccharomyces cerevisiae
• Alignment Length: 548
• Identity: 110/548 - (20%)
• Similarity: 188/548 - (34%)
• Gaps: 135/548 - (24%)

  Fly    22 TGV------RKRRNPFNTQRLKEEKERRQKKRARLIVRNISYKSTEDSLREHFGQWGTLEDVHIL 80
            |||      |..|.|||    ..||....|..:..:|.:  |.:..:|..|.||....... ||.
Yeast   125 TGVSSIELKRDDREPFN----DNEKVVVVKFGSLSLVTH--YANILNSKSEIFGPSFPFRS-HID 182

  Fly    81 KRGDGKLVGCAF---VQYETINQATKAI-LNSNGKELLGRKVFVDWALGKDEYVSKNPKDEEPDE 141
            ...:...:..:|   |...|.|.:.|.. |:|:.:..:..:.|...:.||   .|.:|..  |..
Yeast   183 VVNEQTQLPVSFQEHVSSGTTNSSPKNYQLSSSAQNEIQNQSFNTISYGK---TSSSPLG--PSA 242

  Fly   142 KKPKVEVKEEN---------------GDEKEVKEESDAEVGKEDESSGEDSDAESG-EDEEDSGE 190
            .||:..:..|.               ...||........:.:.|.|:...:...:| ..::|:|:
Yeast   243 AKPRPSLLSERSLRFSFNDPFGLETISQRKESVPFLRNSISQHDLSNVTTTPVPAGMPPQKDAGK 307

  Fly   191 S-----EDEENDEDHKENKDELKSKLDIKN------VKREKQISNDVQEGCTVFIKNVPF----- 239
            |     :||.|:...  |.|||.:  |:.|      ::.....|..|.|.......|:|.
Yeast   308 SLLLLEKDEINESIW--NGDELVN--DVGNSSFGASLQEPPMSSTPVMEWNASSTANIPLFQLSS 368

  Fly   240 ------------------DAEDADLRKACRKFGLV-------SYAIINRQAVSGHSKGTAFVKFK 279
                              |......:......|::       .|.::|:  ::..:|..:..:..
Yeast   369 QENHQSNLLPPSHHSISQDVPHIQSQPNLNNSGVIHSATSLPHYHLLNQ--INASTKTQSIQQSV 431

  Fly   280 AKESADLCLQAGTEFKLMDEVLDPHPALSREEMKSKQSQENKKD----DAKDSRNLYLAREGLIM 340
            :...::|.|...||        :.||..|.....|..:.:....    ..:|:..:...:|....
Yeast   432 SNVPSNLDLNLQTE--------NGHPQSSAPNGSSIFNNQKVNQGFLVSEQDTSTISRQKECSST 488

  Fly   341 AGAKAADGVSASDMAKRHELEQVKTQVLKNL-------NRFVSRNRLSIHNLPQNYDNEKLKQMA 398
            |.|.|....:.:::|....:.|....:|..:       ::....|.|.:.|||.:...::|:|:.
Yeast   489 ASASAFSKNNETNVAGSTTISQADLSLLAKVPPPANPADQNPPCNTLYVGNLPPDATEQELRQLF 553

  Fly   399 LTYTGFRPHECRVMREHKVTPEHPQGKSKGFG---FLSFDT---HQRALAAL---------RKLN 448
            ....|||    |:...:|:. .|..|...|.|   |:.|:.   ..||||.|         ..||
Yeast   554 SNQQGFR----RLSFRNKMN-SHGHGNGHGHGPICFVEFEDVSFATRALAELYGSQLPHPRPSLN 613

  Fly   449 N----------NP-NIFGTQSRPIVAFS 465
            |          || .:.|:.||....:|
Yeast   614 NKGGIRLSFSKNPLGVRGSNSRSKSGYS 641

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4806	NP_611955.2	RRM	<2..>154	CDD:223796	35/156 (22%)
		RRM_SF	49..124	CDD:302621	16/78 (21%)
		RRM3_RBM28_like	230..306	CDD:240861	12/105 (11%)
		RRM4_RBM28_like	379..468	CDD:240862	31/113 (27%)
WHI4	NP_010057.1	RRM_scw1_like	531..624	CDD:409691	26/97 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157343559
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930